Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28285 and ABID97_RS28290 are separated by 104 nucleotidesABID97_RS28290 and ABID97_RS28295 are separated by 150 nucleotidesABID97_RS28295 and ABID97_RS28300 are separated by 176 nucleotidesABID97_RS28300 and ABID97_RS28305 are separated by 1 nucleotides ABID97_RS28285: ABID97_RS28285 - hypothetical protein, at 576,936 to 577,292 _RS28285 ABID97_RS28290: ABID97_RS28290 - hypothetical protein, at 577,397 to 577,696 _RS28290 ABID97_RS28295: ABID97_RS28295 - tRNA-uridine aminocarboxypropyltransferase, at 577,847 to 578,606 _RS28295 ABID97_RS28300: ABID97_RS28300 - acyl-CoA dehydrogenase, at 578,783 to 580,573 _RS28300 ABID97_RS28305: ABID97_RS28305 - MarR family winged helix-turn-helix transcriptional regulator, at 580,575 to 581,102 _RS28305
Group Condition ABID97_RS28285 ABID97_RS28290 ABID97_RS28295 ABID97_RS28300 ABID97_RS28305
carbon source L-Histidine (C) -0.2 -1.5 -0.9 N.D. N.D.
carbon source D-Xylose (C) -0.3 -2.1 +0.1 N.D. N.D.
carbon source propionate (C) -0.2 -2.5 +0.6 N.D. N.D.
phage V2_100 +0.3 -2.7 +0.4 N.D. N.D.
phage V1_10 -0.4 -1.5 +0.1 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.2 -1.9 +0.0 N.D. N.D.
carbon source D-Mannose (C) -0.4 -1.1 -0.2 N.D. N.D.
carbon source L-Lactate (C) -0.2 -1.4 -0.0 N.D. N.D.
carbon source L-Alanine (C) -0.1 -1.2 -0.2 N.D. N.D.
carbon source L-tyrosine (C) -0.1 -1.2 -0.2 N.D. N.D.
carbon source L-Phenylalanine (C) -0.2 -1.1 +0.0 N.D. N.D.
carbon source butyrate (C) -0.3 -0.7 +0.3 N.D. N.D.
carbon source L-Arabinose (C) -0.5 +0.8 -0.6 N.D. N.D.
carbon source L-Fucose (C) -0.2 +1.0 -0.6 N.D. N.D.
carbon source propionate (C) -0.3 +1.1 -0.6 N.D. N.D.
r2a outgrowth control R2A outgrowth control -0.3 +0.8 -0.2 N.D. N.D.
carbon source L-Threonine (C) -0.1 +0.8 -0.3 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.9 -0.2 N.D. N.D.
carbon source L-Glutamine (C) -0.3 +1.0 -0.2 N.D. N.D.
carbon source Fumarate (C) -0.4 +0.7 +0.3 N.D. N.D.
carbon source L-Fucose (C) -0.3 +1.1 -0.2 N.D. N.D.
carbon source succinate (C) -0.3 +1.1 -0.1 N.D. N.D.
carbon source Glycolic Acid (C) -0.4 +0.9 +0.3 N.D. N.D.
carbon source D-Glucuronic Acid (C) -0.3 +0.6 +0.5 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +1.1 -0.2 N.D. N.D.
carbon source L-Glutamic (C) +0.0 +1.1 -0.2 N.D. N.D.
carbon source Adenine (C) -0.1 +1.5 -0.3 N.D. N.D.
carbon source D-Gluconic Acid (C) +0.3 +0.9 -0.1 N.D. N.D.
carbon source Fumarate (C) +0.1 +1.0 -0.0 N.D. N.D.
carbon source Glucuronamide (C) +0.2 +1.1 +0.7 N.D. N.D.
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