Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28235 and ABID97_RS28240 are separated by 17 nucleotidesABID97_RS28240 and ABID97_RS28245 are separated by 22 nucleotidesABID97_RS28245 and ABID97_RS28250 overlap by 4 nucleotidesABID97_RS28250 and ABID97_RS28255 overlap by 4 nucleotides ABID97_RS28235: ABID97_RS28235 - MaoC family dehydratase N-terminal domain-containing protein, at 568,042 to 568,485 _RS28235 ABID97_RS28240: ABID97_RS28240 - MaoC family dehydratase, at 568,503 to 568,931 _RS28240 ABID97_RS28245: ABID97_RS28245 - SDR family NAD(P)-dependent oxidoreductase, at 568,954 to 569,796 _RS28245 ABID97_RS28250: ABID97_RS28250 - acyl-CoA dehydrogenase family protein, at 569,793 to 570,959 _RS28250 ABID97_RS28255: ABID97_RS28255 - long-chain-fatty-acid--CoA ligase, at 570,956 to 572,650 _RS28255
Group Condition ABID97_RS28235 ABID97_RS28240 ABID97_RS28245 ABID97_RS28250 ABID97_RS28255
carbon source D,L-Malic Acid (C) N.D. N.D. -2.6 N.D. -0.4
carbon source D-Galactose (C) N.D. N.D. -2.0 N.D. -0.5
carbon source Tween 20 (C) N.D. N.D. -1.9 N.D. -0.4
carbon source Tween 20 (C) N.D. N.D. -1.4 N.D. -0.6
carbon source butyrate (C) N.D. N.D. -2.0 N.D. +0.1
carbon source butyrate (C) N.D. N.D. -1.8 N.D. -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -1.5 N.D. -0.3
carbon source L-tyrosine (C) N.D. N.D. -1.2 N.D. -0.4
carbon source L-Arabinose (C) N.D. N.D. -0.7 N.D. -0.4
carbon source D-Arabinose (C) N.D. N.D. -0.8 N.D. -0.3
carbon source Ethanol (C) N.D. N.D. -0.9 N.D. -0.2
carbon source Glucuronamide (C) N.D. N.D. -0.8 N.D. -0.3
phage V2_10 N.D. N.D. -1.6 N.D. +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.9 N.D. -0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.4 N.D. -0.6
carbon source Adenine (C) N.D. N.D. -0.8 N.D. -0.3
phage V2_1 N.D. N.D. -0.9 N.D. +0.1
phage V1_10 N.D. N.D. -1.1 N.D. +0.5
carbon source Ethanol (C) N.D. N.D. +0.8 N.D. -1.1
carbon source D-Glucose (C) N.D. N.D. -0.7 N.D. +0.5
carbon source L-Histidine (C) N.D. N.D. +0.7 N.D. -0.7
carbon source Fumarate (C) N.D. N.D. +0.8 N.D. -0.3
carbon source L-Alanine (C) N.D. N.D. +1.0 N.D. -0.5
carbon source L-Threonine (C) N.D. N.D. +0.8 N.D. -0.3
carbon source D-Xylose (C) N.D. N.D. +0.9 N.D. -0.1
carbon source D-Galactose (C) N.D. N.D. +1.0 N.D. +0.1
carbon source D-Arabinose (C) N.D. N.D. +1.2 N.D. +0.1
phage V2_10 N.D. N.D. +0.7 N.D. +0.8
carbon source propionate (C) N.D. N.D. +2.0 N.D. +0.1
phage V2_100 N.D. N.D. +0.8 N.D. +1.5
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ABID97_RS28235
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ABID97_RS28240
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ABID97_RS28255
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