Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28045 and ABID97_RS28050 are separated by 31 nucleotidesABID97_RS28050 and ABID97_RS28055 are separated by 47 nucleotidesABID97_RS28055 and ABID97_RS28060 overlap by 4 nucleotidesABID97_RS28060 and ABID97_RS28065 overlap by 4 nucleotides ABID97_RS28045: ABID97_RS28045 - hypothetical protein, at 526,991 to 527,266 _RS28045 ABID97_RS28050: ABID97_RS28050 - CBS domain-containing protein, at 527,298 to 527,735 _RS28050 ABID97_RS28055: ABID97_RS28055 - 2-oxoacid:ferredoxin oxidoreductase subunit beta, at 527,783 to 528,838 _RS28055 ABID97_RS28060: ABID97_RS28060 - 2-oxoacid:acceptor oxidoreductase subunit alpha, at 528,835 to 530,691 _RS28060 ABID97_RS28065: ABID97_RS28065 - FAD-dependent oxidoreductase, at 530,688 to 532,490 _RS28065
Group Condition ABID97_RS28045 ABID97_RS28050 ABID97_RS28055 ABID97_RS28060 ABID97_RS28065
carbon source L-Phenylalanine (C) N.D. N.D. -0.7 -0.1 -0.1
carbon source L-Arabinose (C) N.D. N.D. -0.7 -0.0 -0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.1 -0.2 -0.4
carbon source L-Asparagine (C) N.D. N.D. -0.4 -0.0 -0.2
carbon source D,L-Malic Acid (C) N.D. N.D. -0.6 -0.2 +0.2
carbon source L-Histidine (C) N.D. N.D. +0.0 -0.0 -0.5
carbon source L-tyrosine (C) N.D. N.D. -0.2 +0.2 -0.6
carbon source D-Serine (C) N.D. N.D. -0.5 -0.1 +0.2
carbon source L-Glutamine (C) N.D. N.D. -0.3 -0.3 +0.3
carbon source Glycolic Acid (C) N.D. N.D. -0.3 -0.1 +0.2
carbon source D-Gluconic Acid (C) N.D. N.D. -0.4 +0.0 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.6 -0.1 -0.6
carbon source L-Arabinose (C) N.D. N.D. -0.3 -0.1 +0.3
carbon source L-Fucose (C) N.D. N.D. -0.4 +0.1 +0.2
carbon source D,L-Malic Acid (C) N.D. N.D. -0.6 +0.2 +0.3
carbon source D-Glucuronic Acid (C) N.D. N.D. -0.2 -0.4 +0.5
carbon source propionate (C) N.D. N.D. -0.4 +0.2 +0.2
carbon source L-Malic (C) N.D. N.D. -0.3 +0.2 +0.2
carbon source D-Sorbitol (C) N.D. N.D. -0.3 +0.0 +0.3
carbon source butyrate (C) N.D. N.D. -0.4 +0.2 +0.4
carbon source L-Proline (C) N.D. N.D. +0.4 +0.1 -0.2
carbon source Glucuronamide (C) N.D. N.D. +0.4 -0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.1 +0.1 +0.4
carbon source Gly-Glu (C) N.D. N.D. +0.6 +0.1 -0.1
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.4 -0.0 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.3 +0.0 +0.3
phage V2_10 N.D. N.D. +0.1 +0.2 +0.3
carbon source butyrate (C) N.D. N.D. +0.3 +0.2 +0.1
carbon source D-Sorbitol (C) N.D. N.D. +0.5 -0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.7 +0.3 +0.4
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