Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS28010 and ABID97_RS28015 overlap by 8 nucleotidesABID97_RS28015 and ABID97_RS28020 overlap by 11 nucleotidesABID97_RS28020 and ABID97_RS28025 overlap by 11 nucleotidesABID97_RS28025 and ABID97_RS28030 overlap by 10 nucleotides ABID97_RS28010: ABID97_RS28010 - hypothetical protein, at 520,455 to 520,676 _RS28010 ABID97_RS28015: ABID97_RS28015 - cupin domain-containing protein, at 520,669 to 521,280 _RS28015 ABID97_RS28020: ABID97_RS28020 - ABC transporter ATP-binding protein, at 521,270 to 521,977 _RS28020 ABID97_RS28025: ABID97_RS28025 - branched-chain amino acid ABC transporter ATP-binding protein/permease, at 521,967 to 523,736 _RS28025 ABID97_RS28030: ABID97_RS28030 - branched-chain amino acid ABC transporter permease, at 523,727 to 524,575 _RS28030
Group Condition ABID97_RS28010 ABID97_RS28015 ABID97_RS28020 ABID97_RS28025 ABID97_RS28030
plant outgrowth control Plant outgrowth control N.D. N.D. -0.9 -0.5 -1.0
carbon source D-Serine (C) N.D. N.D. -0.9 -0.1 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.3 -0.4 -0.5
carbon source D,L-Malic Acid (C) N.D. N.D. +0.4 -0.1 -1.4
carbon source D-Ribose (C) N.D. N.D. -0.8 +0.2 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.7 -0.4 +0.3
carbon source D-Ribose (C) N.D. N.D. -0.7 +0.3 -0.3
carbon source propionate (C) N.D. N.D. -0.6 +0.4 -0.2
carbon source L-Tryptophan (C) N.D. N.D. -0.7 -0.1 +0.4
carbon source D-Galactose (C) N.D. N.D. -0.6 -0.2 +0.5
carbon source butyrate (C) N.D. N.D. -0.9 +0.1 +0.7
carbon source D-Glucose (C) N.D. N.D. -0.8 +0.2 +0.6
carbon source succinate (C) N.D. N.D. -0.6 +0.3 +0.4
phage V2_100 N.D. N.D. -0.5 +0.1 +0.5
r2a outgrowth control R2A outgrowth control N.D. N.D. -0.6 +0.3 +0.5
carbon source D-Fructose (C) N.D. N.D. -0.4 -0.2 +0.7
carbon source L-Threonine (C) N.D. N.D. -0.4 -0.0 +0.8
carbon source D-Serine (C) N.D. N.D. -0.4 +0.0 +0.7
phage V1_10 N.D. N.D. +0.6 -0.3 +0.4
carbon source Tween 20 (C) N.D. N.D. +0.5 -0.3 +0.6
carbon source L-Alanine (C) N.D. N.D. -0.1 +0.3 +0.7
carbon source D-Arabinose (C) N.D. N.D. -0.1 +0.2 +0.9
carbon source L-Alanine (C) N.D. N.D. -0.3 +0.1 +1.2
carbon source D-Xylose (C) N.D. N.D. +0.6 +0.2 +0.3
carbon source D-Mannose (C) N.D. N.D. +0.2 +0.1 +0.9
carbon source Glycolic Acid (C) N.D. N.D. +0.5 +0.2 +0.6
carbon source L-tyrosine (C) N.D. N.D. +1.2 +0.0 +0.0
carbon source L-Fucose (C) N.D. N.D. +0.7 +0.2 +0.3
carbon source L-Leucine (C) N.D. N.D. +0.4 +0.1 +0.9
carbon source Glucuronamide (C) N.D. N.D. +0.7 +0.2 +0.8
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