Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27995 and ABID97_RS28000 are separated by 47 nucleotidesABID97_RS28000 and ABID97_RS28005 are separated by 40 nucleotidesABID97_RS28005 and ABID97_RS28010 overlap by 8 nucleotidesABID97_RS28010 and ABID97_RS28015 overlap by 8 nucleotides ABID97_RS27995: ABID97_RS27995 - VOC family protein, at 517,700 to 518,707 _RS27995 ABID97_RS28000: ABID97_RS28000 - NADPH-dependent FMN reductase, at 518,755 to 519,342 _RS28000 ABID97_RS28005: ABID97_RS28005 - phosphopyruvate hydratase, at 519,383 to 520,462 _RS28005 ABID97_RS28010: ABID97_RS28010 - hypothetical protein, at 520,455 to 520,676 _RS28010 ABID97_RS28015: ABID97_RS28015 - cupin domain-containing protein, at 520,669 to 521,280 _RS28015
Group Condition ABID97_RS27995 ABID97_RS28000 ABID97_RS28005 ABID97_RS28010 ABID97_RS28015
carbon source butyrate (C) -0.1 -1.1 -2.2 N.D. N.D.
r2a outgrowth control R2A outgrowth control -0.3 -1.7 -0.8 N.D. N.D.
carbon source L-Arabinose (C) -0.3 -2.4 +0.3 N.D. N.D.
carbon source L-Alanine (C) -0.3 -2.8 +0.6 N.D. N.D.
phage V2_100 +0.3 -2.1 -0.2 N.D. N.D.
carbon source L-Alanine (C) +0.2 -2.7 +0.5 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.5 -0.7 N.D. N.D.
carbon source propionate (C) +0.3 -2.4 +0.4 N.D. N.D.
carbon source L-Asparagine (C) -0.4 -1.1 -0.0 N.D. N.D.
carbon source succinate (C) +0.1 -1.5 -0.0 N.D. N.D.
carbon source Fumarate (C) -0.1 -1.4 +0.1 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.6 -1.9 +0.4 N.D. N.D.
carbon source D-Serine (C) -0.3 -1.0 +0.4 N.D. N.D.
carbon source L-Proline (C) +0.5 -0.8 +0.4 N.D. N.D.
carbon source L-Fucose (C) +0.7 -0.8 +0.2 N.D. N.D.
carbon source propionate (C) +0.6 -0.8 +0.5 N.D. N.D.
carbon source L-Leucine (C) -0.1 +1.0 -0.4 N.D. N.D.
carbon source L-tyrosine (C) -0.8 +1.0 +0.2 N.D. N.D.
carbon source L-Malic (C) -0.1 +1.1 -0.6 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.8 +1.7 -0.4 N.D. N.D.
carbon source L-Histidine (C) -0.6 +1.0 +0.3 N.D. N.D.
carbon source Tween 20 (C) -0.5 +1.2 +0.1 N.D. N.D.
carbon source Glycolic Acid (C) -0.4 +1.0 +0.3 N.D. N.D.
carbon source Adenine (C) -0.1 +1.2 -0.3 N.D. N.D.
carbon source Adenine (C) -0.4 +0.6 +0.8 N.D. N.D.
carbon source Glycerol (C) -0.1 +1.3 -0.2 N.D. N.D.
carbon source D-Glucose (C) -0.3 +1.0 +0.4 N.D. N.D.
carbon source L-Fucose (C) +0.1 +0.5 +1.0 N.D. N.D.
carbon source D-Arabinose (C) -0.0 +1.3 +0.3 N.D. N.D.
carbon source D-Ribose (C) +0.6 +0.8 +0.3 N.D. N.D.
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ABID97_RS27995
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ABID97_RS28000
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