Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS27880 and ABID97_RS27885 are separated by 158 nucleotidesABID97_RS27885 and ABID97_RS27890 are separated by 30 nucleotidesABID97_RS27890 and ABID97_RS27895 overlap by 4 nucleotidesABID97_RS27895 and ABID97_RS27900 are separated by 133 nucleotides ABID97_RS27880: ABID97_RS27880 - SDR family oxidoreductase, at 497,118 to 497,858 _RS27880 ABID97_RS27885: ABID97_RS27885 - 2-hydroxychromene-2-carboxylate isomerase, at 498,017 to 498,607 _RS27885 ABID97_RS27890: ABID97_RS27890 - AMP-binding protein, at 498,638 to 500,302 _RS27890 ABID97_RS27895: ABID97_RS27895 - AraC family transcriptional regulator, at 500,299 to 501,252 _RS27895 ABID97_RS27900: ABID97_RS27900 - DUF4242 domain-containing protein, at 501,386 to 501,658 _RS27900
Group Condition ABID97_RS27880 ABID97_RS27885 ABID97_RS27890 ABID97_RS27895 ABID97_RS27900
carbon source L-Alanine (C) N.D. N.D. -0.2 -1.0 -1.6
plant outgrowth control Plant outgrowth control N.D. N.D. -0.1 -0.3 -1.9
carbon source acetate (C) N.D. N.D. -0.0 -0.2 -2.1
carbon source L-tyrosine (C) N.D. N.D. +0.4 +0.9 -3.2
carbon source Formate (C) N.D. N.D. -0.3 -0.4 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. -0.3 +0.3 -1.7
carbon source D-Ribose (C) N.D. N.D. -0.1 -0.5 -0.8
carbon source D,L-Lactate (C) N.D. N.D. -0.2 -0.7 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. +0.4 -0.7 -1.1
carbon source D-Galactose (C) N.D. N.D. +0.0 +0.3 -1.6
plant outgrowth control Plant outgrowth control N.D. N.D. -0.1 -0.5 -0.7
carbon source D-Ribose (C) N.D. N.D. -0.3 -0.3 -0.7
r2a outgrowth control R2A outgrowth control N.D. N.D. +0.1 -0.1 -1.0
carbon source Adenine (C) N.D. N.D. +0.3 -0.4 -0.9
carbon source butyrate (C) N.D. N.D. -0.4 -0.6 +0.3
phage V2_10 N.D. N.D. +0.5 +0.4 -1.4
carbon source L-Arabinose (C) N.D. N.D. +0.1 +0.2 -0.8
phage V2_10 N.D. N.D. +0.0 +0.3 -0.9
carbon source D,L-Malic Acid (C) N.D. N.D. -0.4 -0.3 +0.7
carbon source L-Histidine (C) N.D. N.D. -0.7 +0.6 +0.0
carbon source D-Arabinose (C) N.D. N.D. -0.3 -0.5 +1.0
phage V2_100 N.D. N.D. +0.6 +0.4 -0.6
carbon source Tween 20 (C) N.D. N.D. -0.3 +0.2 +0.7
carbon source Glucuronamide (C) N.D. N.D. +0.2 +0.9 -0.2
carbon source D-Serine (C) N.D. N.D. -0.3 +1.0 +0.2
carbon source Glucuronamide (C) N.D. N.D. +0.2 -0.1 +1.0
carbon source L-Fucose (C) N.D. N.D. -0.1 +0.4 +0.9
carbon source D-Fructose (C) N.D. N.D. +0.1 +0.1 +1.0
carbon source D-Mannose (C) N.D. N.D. +0.4 +0.3 +1.1
carbon source propionate (C) N.D. N.D. +0.2 +6.0 +0.7
remove
ABID97_RS27880
plot		 remove
ABID97_RS27885
plot		 remove
ABID97_RS27890		 remove
ABID97_RS27895
plot		 remove
ABID97_RS27900
plot