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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS27870 and ABID97_RS27875 are separated by 112 nucleotides
ABID97_RS27875 and ABID97_RS27880 are separated by 7 nucleotides
ABID97_RS27880 and ABID97_RS27885 are separated by 158 nucleotides
ABID97_RS27885 and ABID97_RS27890 are separated by 30 nucleotides
ABID97_RS27870: ABID97_RS27870 - fatty acid desaturase, at 495,028 to 496,011
_RS27870
ABID97_RS27875: ABID97_RS27875 - nitronate monooxygenase family protein, at 496,124 to 497,110
_RS27875
ABID97_RS27880: ABID97_RS27880 - SDR family oxidoreductase, at 497,118 to 497,858
_RS27880
ABID97_RS27885: ABID97_RS27885 - 2-hydroxychromene-2-carboxylate isomerase, at 498,017 to 498,607
_RS27885
ABID97_RS27890: ABID97_RS27890 - AMP-binding protein, at 498,638 to 500,302
_RS27890
Group
Condition
ABID97
_RS27870
ABID97
_RS27875
ABID97
_RS27880
ABID97
_RS27885
ABID97
_RS27890
carbon source
L-Histidine (C)
-0.7
N.D.
N.D.
N.D.
-0.7
carbon source
Ethanol (C)
-0.5
N.D.
N.D.
N.D.
-0.3
carbon source
D-Serine (C)
-0.4
N.D.
N.D.
N.D.
-0.3
carbon source
D-Ribose (C)
-0.4
N.D.
N.D.
N.D.
-0.3
carbon source
D-Glucose (C)
-0.6
N.D.
N.D.
N.D.
-0.1
carbon source
L-Glutamic (C)
-0.7
N.D.
N.D.
N.D.
+0.1
carbon source
L-Phenylalanine (C)
-0.2
N.D.
N.D.
N.D.
-0.3
carbon source
L-tyrosine (C)
+0.2
N.D.
N.D.
N.D.
-0.4
carbon source
L-tyrosine (C)
-0.6
N.D.
N.D.
N.D.
+0.4
phage
V1_10
+0.3
N.D.
N.D.
N.D.
-0.4
carbon source
D-Gluconic Acid (C)
-0.4
N.D.
N.D.
N.D.
+0.2
carbon source
butyrate (C)
+0.2
N.D.
N.D.
N.D.
-0.4
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+0.3
N.D.
N.D.
N.D.
-0.3
carbon source
Ethanol (C)
+0.3
N.D.
N.D.
N.D.
-0.2
carbon source
D-Gluconic Acid (C)
+0.3
N.D.
N.D.
N.D.
-0.2
carbon source
D-Mannose (C)
-0.2
N.D.
N.D.
N.D.
+0.4
carbon source
succinate (C)
+0.4
N.D.
N.D.
N.D.
-0.2
carbon source
D,L-Lactate (C)
+0.4
N.D.
N.D.
N.D.
-0.2
carbon source
L-Tryptophan (C)
+0.2
N.D.
N.D.
N.D.
+0.4
carbon source
Adenine (C)
+0.2
N.D.
N.D.
N.D.
+0.3
carbon source
L-Alanine (C)
+0.5
N.D.
N.D.
N.D.
+0.1
carbon source
D-Sorbitol (C)
+0.2
N.D.
N.D.
N.D.
+0.3
carbon source
L-Leucine (C)
+0.5
N.D.
N.D.
N.D.
+0.1
r2a outgrowth control
R2A outgrowth control
-0.2
N.D.
N.D.
N.D.
+0.8
phage
V1_1
+0.2
N.D.
N.D.
N.D.
+0.4
carbon source
propionate (C)
+0.5
N.D.
N.D.
N.D.
+0.2
phage
V2_1
+0.3
N.D.
N.D.
N.D.
+0.3
carbon source
D-Fructose (C)
+0.7
N.D.
N.D.
N.D.
+0.1
phage
V2_100
+0.4
N.D.
N.D.
N.D.
+0.6
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+1.1
N.D.
N.D.
N.D.
+0.4
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