Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27805 and ABID97_RS27810 overlap by 4 nucleotidesABID97_RS27810 and ABID97_RS27815 are separated by 4 nucleotidesABID97_RS27815 and ABID97_RS27820 are separated by 15 nucleotidesABID97_RS27820 and ABID97_RS27825 overlap by 4 nucleotides ABID97_RS27805: ABID97_RS27805 - branched-chain amino acid ABC transporter permease, at 481,728 to 482,801 _RS27805 ABID97_RS27810: ABID97_RS27810 - ABC transporter ATP-binding protein, at 482,798 to 483,562 _RS27810 ABID97_RS27815: ABID97_RS27815 - ABC transporter ATP-binding protein, at 483,567 to 484,349 _RS27815 ABID97_RS27820: ABID97_RS27820 - ABC transporter substrate-binding protein, at 484,365 to 485,564 _RS27820 ABID97_RS27825: ABID97_RS27825 - AMP-binding protein, at 485,561 to 486,232 _RS27825
Group Condition ABID97_RS27805 ABID97_RS27810 ABID97_RS27815 ABID97_RS27820 ABID97_RS27825
r2a outgrowth control R2A outgrowth control N.D. N.D. N.D. -1.2 -1.0
carbon source L-Asparagine (C) N.D. N.D. N.D. -1.4 -0.8
carbon source L-tyrosine (C) N.D. N.D. N.D. -1.9 -0.2
carbon source acetate (C) N.D. N.D. N.D. -1.8 -0.1
carbon source Ethanol (C) N.D. N.D. N.D. -1.7 -0.2
carbon source L-Lactate (C) N.D. N.D. N.D. -1.6 +0.1
carbon source Glycerol (C) N.D. N.D. N.D. -1.5 +0.2
carbon source L-Glutamic (C) N.D. N.D. N.D. -0.7 -0.5
carbon source succinate (C) N.D. N.D. N.D. -1.1 -0.0
phage V2_10 N.D. N.D. N.D. -0.6 -0.6
carbon source Glucuronamide (C) N.D. N.D. N.D. -0.7 -0.3
plant outgrowth control Plant outgrowth control N.D. N.D. N.D. -0.8 -0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. -0.6 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. -0.8 -0.2
carbon source D-Mannose (C) N.D. N.D. N.D. -0.6 -0.3
carbon source D-Gluconic Acid (C) N.D. N.D. N.D. -0.9 +0.2
carbon source D-Xylose (C) N.D. N.D. N.D. -0.9 +0.2
carbon source L-Tryptophan (C) N.D. N.D. N.D. -0.9 +0.2
carbon source casaminos (C) N.D. N.D. N.D. -0.7 +0.3
carbon source Ethanol (C) N.D. N.D. N.D. -0.9 +0.5
r2a outgrowth control R2A outgrowth control N.D. N.D. N.D. +0.4 -0.5
carbon source Adenine (C) N.D. N.D. N.D. -0.6 +0.6
carbon source D-Glucose (C) N.D. N.D. N.D. +0.6 -0.5
phage V1_10 N.D. N.D. N.D. +0.9 -0.2
carbon source D-Galactose (C) N.D. N.D. N.D. +0.7 +0.1
phage V2_100 N.D. N.D. N.D. +1.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. +0.7 +0.4
carbon source Tween 20 (C) N.D. N.D. N.D. +0.9 +0.2
carbon source D-Glucose (C) N.D. N.D. N.D. +0.7 +0.4
carbon source D,L-Malic Acid (C) N.D. N.D. N.D. +1.5 -0.1
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