Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27785 and ABID97_RS27790 are separated by 108 nucleotidesABID97_RS27790 and ABID97_RS27795 are separated by 18 nucleotidesABID97_RS27795 and ABID97_RS27800 are separated by 203 nucleotidesABID97_RS27800 and ABID97_RS27805 are separated by 4 nucleotides ABID97_RS27785: ABID97_RS27785 - TetR/AcrR family transcriptional regulator, at 477,837 to 478,454 _RS27785 ABID97_RS27790: ABID97_RS27790 - TolC family protein, at 478,563 to 480,038 _RS27790 ABID97_RS27795: ABID97_RS27795 - TetR/AcrR family transcriptional regulator, at 480,057 to 480,647 _RS27795 ABID97_RS27800: ABID97_RS27800 - branched-chain amino acid ABC transporter permease, at 480,851 to 481,723 _RS27800 ABID97_RS27805: ABID97_RS27805 - branched-chain amino acid ABC transporter permease, at 481,728 to 482,801 _RS27805
Group Condition ABID97_RS27785 ABID97_RS27790 ABID97_RS27795 ABID97_RS27800 ABID97_RS27805
carbon source D-Mannose (C) -0.2 -0.1 -4.0 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.6 -0.1 -0.6 -0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.1 -3.7 -0.4 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 -0.3 -1.0 -0.6 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.1 -0.6 -0.5 +0.0 N.D.
carbon source L-Arabinose (C) -0.0 -0.0 -2.3 -0.4 N.D.
carbon source D,L-Malic Acid (C) -2.7 -0.2 +0.5 -0.2 N.D.
phage V2_10 -0.3 -0.3 -1.6 -0.4 N.D.
carbon source casaminos (C) -0.0 +0.2 -2.1 -0.5 N.D.
phage V1_10 -0.9 +0.1 -1.4 -0.2 N.D.
carbon source L-Proline (C) -0.1 +0.2 -2.3 +0.0 N.D.
plant outgrowth control Plant outgrowth control -0.9 -0.4 -1.0 +0.0 N.D.
carbon source L-Histidine (C) -0.3 -0.1 -2.0 +0.3 N.D.
carbon source D-Fructose (C) -0.2 +0.3 -1.7 -0.5 N.D.
carbon source D-Mannose (C) -0.2 -0.0 -1.3 -0.6 N.D.
carbon source L-Histidine (C) -0.7 +0.1 -0.6 -0.7 N.D.
carbon source L-Leucine (C) -0.3 -0.0 -1.6 -0.0 N.D.
carbon source D,L-Lactate (C) -0.3 -0.2 -1.1 -0.3 N.D.
plant outgrowth control Plant outgrowth control -0.7 -0.2 -0.9 +0.2 N.D.
carbon source acetate (C) -0.2 +0.2 -1.4 -0.1 N.D.
carbon source D-Serine (C) -0.1 +0.1 -1.7 +0.6 N.D.
carbon source L-Alanine (C) -1.5 +0.3 +0.3 +0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -1.3 -0.2 +0.7 +0.2 N.D.
carbon source D,L-Malic Acid (C) +0.3 +0.0 +0.7 -1.4 N.D.
carbon source L-Alanine (C) -1.1 +0.4 +1.0 -0.2 N.D.
carbon source Tween 20 (C) -0.3 +0.3 +1.0 +0.3 N.D.
carbon source butyrate (C) +1.4 -0.0 +0.8 -0.6 N.D.
carbon source Formate (C) -0.1 +0.3 +1.0 +0.5 N.D.
carbon source Ethanol (C) +0.1 +0.4 +1.2 +0.4 N.D.
carbon source butyrate (C) +1.3 +0.0 +1.3 +0.3 N.D.
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