Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27735 and ABID97_RS27740 overlap by 4 nucleotidesABID97_RS27740 and ABID97_RS27745 are separated by 7 nucleotidesABID97_RS27745 and ABID97_RS27750 overlap by 11 nucleotidesABID97_RS27750 and ABID97_RS27755 overlap by 14 nucleotides ABID97_RS27735: ABID97_RS27735 - ABC transporter permease, at 467,333 to 468,130 _RS27735 ABID97_RS27740: ABID97_RS27740 - ABC transporter ATP-binding protein, at 468,127 to 468,975 _RS27740 ABID97_RS27745: ABID97_RS27745 - HEAT repeat domain-containing protein, at 468,983 to 469,981 _RS27745 ABID97_RS27750: ABID97_RS27750 - DUF971 domain-containing protein, at 469,971 to 470,309 _RS27750 ABID97_RS27755: ABID97_RS27755 - tripartite tricarboxylate transporter substrate binding protein, at 470,296 to 471,312 _RS27755
Group Condition ABID97_RS27735 ABID97_RS27740 ABID97_RS27745 ABID97_RS27750 ABID97_RS27755
carbon source propionate (C) -0.6 N.D. -0.4 N.D. -0.4
carbon source L-Alanine (C) +0.1 N.D. -0.4 N.D. -0.9
carbon source L-Glutamic (C) -0.5 N.D. -0.2 N.D. -0.2
carbon source Tween 20 (C) -0.3 N.D. -0.2 N.D. -0.4
carbon source pyruvate (C) -0.4 N.D. -0.3 N.D. -0.2
carbon source L-Tryptophan (C) -0.5 N.D. -0.3 N.D. -0.0
carbon source D,L-Lactate (C) -0.5 N.D. -0.1 N.D. -0.2
r2a outgrowth control R2A outgrowth control -0.3 N.D. -0.4 N.D. -0.0
carbon source Tween 20 (C) -0.3 N.D. -0.4 N.D. +0.1
carbon source propionate (C) -0.6 N.D. -0.1 N.D. +0.1
carbon source L-Leucine (C) -0.6 N.D. +0.2 N.D. -0.0
carbon source a-Ketoglutaric (C) -0.5 N.D. +0.1 N.D. -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 N.D. -0.5 N.D. -0.3
carbon source butyrate (C) -0.4 N.D. -0.2 N.D. +0.3
carbon source D-Serine (C) -0.6 N.D. +0.0 N.D. +0.2
carbon source pyruvate (C) +0.3 N.D. -0.3 N.D. -0.3
plant outgrowth control Plant outgrowth control +0.3 N.D. -0.5 N.D. +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 N.D. -0.1 N.D. -0.4
phage V2_100 -0.4 N.D. -0.1 N.D. +0.4
carbon source L-Phenylalanine (C) +0.4 N.D. -0.2 N.D. -0.3
phage V2_10 -0.3 N.D. +0.0 N.D. +0.5
carbon source Fumarate (C) +0.1 N.D. -0.3 N.D. +0.4
carbon source L-Alanine (C) +0.3 N.D. -0.4 N.D. +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 N.D. -0.0 N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.5 N.D. +0.3 N.D. -0.2
carbon source L-tyrosine (C) +1.1 N.D. -0.6 N.D. +0.2
carbon source L-tyrosine (C) +0.8 N.D. -0.2 N.D. +0.1
carbon source casaminos (C) +0.5 N.D. +0.2 N.D. +0.1
carbon source acetate (C) +0.4 N.D. +0.1 N.D. +0.3
carbon source Adenine (C) +0.2 N.D. +0.3 N.D. +0.4
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ABID97_RS27735
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