Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27695 and ABID97_RS27700 are separated by 26 nucleotidesABID97_RS27700 and ABID97_RS27705 are separated by 233 nucleotidesABID97_RS27705 and ABID97_RS27710 are separated by 10 nucleotidesABID97_RS27710 and ABID97_RS27715 are separated by 226 nucleotides ABID97_RS27695: ABID97_RS27695 - phospholipase D-like domain-containing protein, at 457,881 to 459,149 _RS27695 ABID97_RS27700: ABID97_RS27700 - HAMP domain-containing sensor histidine kinase, at 459,176 to 460,300 _RS27700 ABID97_RS27705: ABID97_RS27705 - chromate efflux transporter, at 460,534 to 461,910 _RS27705 ABID97_RS27710: ABID97_RS27710 - Fe-Mn family superoxide dismutase, at 461,921 to 462,847 _RS27710 ABID97_RS27715: ABID97_RS27715 - GntR family transcriptional regulator, at 463,074 to 463,847 _RS27715
Group Condition ABID97_RS27695 ABID97_RS27700 ABID97_RS27705 ABID97_RS27710 ABID97_RS27715
carbon source Ethanol (C) +0.1 -0.1 -0.2 -0.4 -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.5 +0.1 -0.3 -0.3
carbon source L-Alanine (C) +0.3 -0.1 -0.2 +0.0 -0.6
carbon source butyrate (C) +0.2 -0.2 +0.2 -0.3 -0.2
carbon source L-tyrosine (C) +0.8 +0.4 -0.3 -0.3 -0.8
phage V2_100 +0.3 +0.6 +0.3 -0.2 -1.1
carbon source D-Galactose (C) +0.4 -0.3 -0.1 +0.2 +0.0
carbon source L-Glutamic (C) -0.0 +0.1 -0.1 -0.3 +0.6
carbon source L-Histidine (C) -0.2 +0.2 +0.0 +0.5 -0.2
carbon source L-Malic (C) -0.2 -0.2 +0.1 +0.2 +0.4
carbon source casaminos (C) -0.3 +0.1 -0.1 +0.3 +0.6
carbon source propionate (C) +0.2 +0.8 +0.1 +0.1 -0.6
carbon source Tween 20 (C) +0.3 -0.2 -0.1 +0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.1 +0.5 +0.0 +0.5
carbon source L-Proline (C) +0.2 +0.4 +0.2 +0.1 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.3 -0.7 +0.2 +0.1 +0.8
carbon source D-Serine (C) -0.0 +0.1 -0.2 +0.3 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.3 +0.2 +0.4 -0.2
phage V2_10 +0.1 +0.2 -0.3 +0.3 +0.7
carbon source D-Sorbitol (C) -0.3 +0.0 +0.2 +0.2 +0.8
carbon source L-Proline (C) +0.1 -0.1 -0.1 +0.2 +0.8
carbon source a-Ketoglutaric (C) +0.4 +0.3 +0.2 +0.2 -0.0
control NP +0.2 +0.4 +0.1 +0.1 +0.4
phage V1_10 -0.3 +0.2 +0.1 +0.3 +0.9
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.2 +0.2 +0.2 +0.4
carbon source Glycerol (C) +0.1 +0.0 +0.2 +0.1 +0.9
carbon source Glycolic Acid (C) +0.2 +0.3 +0.2 +0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.3 +0.3 +0.4 +0.8
carbon source Glycolic Acid (C) +0.3 +0.2 +0.5 +0.4 +0.8
carbon source propionate (C) +0.2 +1.3 +0.0 +2.1 +0.0
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ABID97_RS27695
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ABID97_RS27700
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ABID97_RS27715
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