Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS27465 and ABID97_RS27470 are separated by 43 nucleotidesABID97_RS27470 and ABID97_RS27475 are separated by 158 nucleotidesABID97_RS27475 and ABID97_RS27480 are separated by 125 nucleotidesABID97_RS27480 and ABID97_RS27485 overlap by 4 nucleotides ABID97_RS27465: ABID97_RS27465 - malonate decarboxylase subunit alpha, at 409,292 to 410,974 _RS27465 ABID97_RS27470: ABID97_RS27470 - SLC13 family permease, at 411,018 to 412,391 _RS27470 ABID97_RS27475: ABID97_RS27475 - LysR family transcriptional regulator, at 412,550 to 413,464 _RS27475 ABID97_RS27480: ABID97_RS27480 - type II toxin-antitoxin system RelB/DinJ family antitoxin, at 413,590 to 413,898 _RS27480 ABID97_RS27485: ABID97_RS27485 - type II toxin-antitoxin system RelE/ParE family toxin, at 413,895 to 414,191 _RS27485
Group Condition ABID97_RS27465 ABID97_RS27470 ABID97_RS27475 ABID97_RS27480 ABID97_RS27485
phage V1_1 -1.1 -0.0 -0.3 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.1 -0.9 -0.3 N.D. N.D.
carbon source D-Glucose (C) -0.2 -0.4 -0.4 N.D. N.D.
plant outgrowth control Plant outgrowth control -0.5 -0.0 -0.5 N.D. N.D.
carbon source D-Glucuronic Acid (C) -0.3 -0.4 -0.2 N.D. N.D.
carbon source D-Lactate (C) -0.2 -0.3 -0.5 N.D. N.D.
r2a outgrowth control R2A outgrowth control -0.4 -0.8 +0.5 N.D. N.D.
carbon source D-Arabinose (C) +0.3 -0.5 -0.4 N.D. N.D.
carbon source D-Ribose (C) -0.4 -0.4 +0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.2 +0.3 N.D. N.D.
carbon source D-Arabinose (C) +0.7 +0.2 -0.2 N.D. N.D.
carbon source L-Asparagine (C) +0.7 +0.3 -0.3 N.D. N.D.
carbon source L-Arabinose (C) +0.2 -0.1 +0.7 N.D. N.D.
carbon source L-tyrosine (C) +0.8 -0.2 +0.4 N.D. N.D.
carbon source D,L-Lactate (C) +0.5 +0.1 +0.4 N.D. N.D.
carbon source a-Ketoglutaric (C) +0.2 +0.4 +0.4 N.D. N.D.
carbon source L-Glutamic (C) +0.5 +0.1 +0.4 N.D. N.D.
carbon source D-Glucose (C) +0.9 -0.0 +0.1 N.D. N.D.
carbon source L-Alanine (C) +1.1 +0.3 -0.4 N.D. N.D.
carbon source L-Fucose (C) +0.6 +0.1 +0.4 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +0.4 -0.1 N.D. N.D.
carbon source propionate (C) +0.5 +0.4 +0.2 N.D. N.D.
carbon source L-Threonine (C) +0.9 -0.0 +0.2 N.D. N.D.
carbon source Ethanol (C) +0.9 +0.1 +0.3 N.D. N.D.
carbon source L-Malic (C) +0.3 +0.6 +0.5 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.7 +0.4 +0.2 N.D. N.D.
carbon source acetate (C) +0.9 +0.5 -0.0 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.6 +0.3 +0.6 N.D. N.D.
carbon source butyrate (C) +0.7 +0.3 +0.5 N.D. N.D.
carbon source D-Serine (C) +0.8 +0.5 +0.3 N.D. N.D.
remove
ABID97_RS27465
plot		 remove
ABID97_RS27470
plot		 remove
ABID97_RS27475		 remove
ABID97_RS27480
plot		 remove
ABID97_RS27485
plot