Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27420 and ABID97_RS27425 are separated by 14 nucleotidesABID97_RS27425 and ABID97_RS27430 are separated by 112 nucleotidesABID97_RS27430 and ABID97_RS27435 are separated by 98 nucleotidesABID97_RS27435 and ABID97_RS27440 overlap by 4 nucleotides ABID97_RS27420: ABID97_RS27420 - ABC transporter substrate-binding protein, at 400,178 to 401,017 _RS27420 ABID97_RS27425: ABID97_RS27425 - tannase/feruloyl esterase family alpha/beta hydrolase, at 401,032 to 402,741 _RS27425 ABID97_RS27430: ABID97_RS27430 - acetate--CoA ligase, at 402,854 to 404,776 _RS27430 ABID97_RS27435: ABID97_RS27435 - acyltransferase domain-containing protein, at 404,875 to 405,783 _RS27435 ABID97_RS27440: ABID97_RS27440 - triphosphoribosyl-dephospho-CoA synthase, at 405,780 to 406,643 _RS27440
Group Condition ABID97_RS27420 ABID97_RS27425 ABID97_RS27430 ABID97_RS27435 ABID97_RS27440
carbon source casaminos (C) -0.4 -0.1 -0.3 N.D. -0.4
carbon source L-Phenylalanine (C) -0.5 -0.3 -0.4 N.D. +0.1
carbon source D-Lactate (C) +0.1 -0.3 -0.5 N.D. -0.4
carbon source D-Glucose (C) +0.3 -0.5 -0.4 N.D. -0.2
carbon source Gly-Glu (C) +0.3 -0.1 -0.3 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.2 +0.4 N.D. -0.4
carbon source D-Sorbitol (C) -0.2 +0.1 -0.1 N.D. +0.5
phage V2_10 -0.3 +0.3 +0.3 N.D. +0.1
r2a outgrowth control R2A outgrowth control +0.4 +0.2 +0.1 N.D. -0.4
carbon source D,L-Malic Acid (C) +0.0 +0.3 -0.4 N.D. +0.5
carbon source L-tyrosine (C) +0.4 +0.2 +0.3 N.D. -0.4
carbon source a-Ketoglutaric (C) -0.3 +0.4 +0.3 N.D. +0.1
carbon source D,L-Lactate (C) +0.4 +0.1 -0.2 N.D. +0.5
carbon source Formate (C) -0.2 +0.3 +0.1 N.D. +0.6
carbon source D-Gluconic Acid (C) +0.3 -0.0 -0.1 N.D. +0.8
carbon source D-Sorbitol (C) +0.1 +0.3 -0.0 N.D. +0.5
carbon source L-Threonine (C) +0.4 +0.0 +0.1 N.D. +0.4
carbon source D-Arabinose (C) +0.3 +0.1 +0.2 N.D. +0.3
phage V2_100 -0.0 +0.2 +0.8 N.D. +0.1
carbon source D-Serine (C) +0.4 +0.1 +0.1 N.D. +0.4
carbon source Ethanol (C) +0.5 +0.3 +0.0 N.D. +0.3
carbon source L-Glutamine (C) +0.6 +0.1 -0.0 N.D. +0.4
carbon source Glycerol (C) +0.5 +0.0 +0.1 N.D. +0.6
phage V2_1 +0.6 +0.1 +0.3 N.D. +0.2
carbon source Ethanol (C) +0.1 +0.2 +0.3 N.D. +0.7
carbon source D,L-Malic Acid (C) +0.1 +0.4 +0.1 N.D. +0.7
carbon source L-Histidine (C) +0.3 +0.3 -0.1 N.D. +0.7
carbon source acetate (C) -0.3 +0.2 +0.4 N.D. +1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +0.3 +0.3 N.D. -0.1
carbon source propionate (C) +0.6 +0.4 +0.3 N.D. +0.1
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