Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27390 and ABID97_RS27395 are separated by 14 nucleotidesABID97_RS27395 and ABID97_RS27400 are separated by 157 nucleotidesABID97_RS27400 and ABID97_RS27405 are separated by 49 nucleotidesABID97_RS27405 and ABID97_RS27410 are separated by 3 nucleotides ABID97_RS27390: ABID97_RS27390 - biotin/lipoyl-containing protein, at 395,703 to 396,116 _RS27390 ABID97_RS27395: ABID97_RS27395 - 5-oxoprolinase subunit PxpA, at 396,131 to 396,895 _RS27395 ABID97_RS27400: ABID97_RS27400 - SDR family oxidoreductase, at 397,053 to 397,805 _RS27400 ABID97_RS27405: ABID97_RS27405 - amino acid ABC transporter permease, at 397,855 to 398,556 _RS27405 ABID97_RS27410: ABID97_RS27410 - amino acid ABC transporter permease, at 398,560 to 399,318 _RS27410
Group Condition ABID97_RS27390 ABID97_RS27395 ABID97_RS27400 ABID97_RS27405 ABID97_RS27410
carbon source Tween 20 (C) N.D. -1.0 N.D. +0.1 -0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.0 N.D. -0.5 -0.5
carbon source D,L-Malic Acid (C) N.D. -0.5 N.D. -0.5 -0.0
carbon source L-Phenylalanine (C) N.D. -0.3 N.D. -0.3 -0.3
carbon source Fumarate (C) N.D. -0.6 N.D. +0.1 -0.3
carbon source propionate (C) N.D. -1.4 N.D. +0.7 -0.0
control NP N.D. -0.6 N.D. -0.2 +0.1
carbon source L-Alanine (C) N.D. -0.7 N.D. +0.1 -0.2
carbon source D-Xylose (C) N.D. -0.6 N.D. +0.3 -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 N.D. +0.4 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.6 N.D. +0.1 +0.1
carbon source L-Arabinose (C) N.D. -0.5 N.D. +0.3 -0.1
carbon source Gly-Glu (C) N.D. -0.4 N.D. +0.3 -0.2
carbon source D,L-Lactate (C) N.D. -0.4 N.D. +0.4 -0.0
carbon source a-Ketoglutaric (C) N.D. -0.6 N.D. +0.6 -0.0
carbon source L-tyrosine (C) N.D. -0.5 N.D. +0.5 +0.0
carbon source L-Histidine (C) N.D. +0.3 N.D. +0.1 -0.3
carbon source propionate (C) N.D. -0.2 N.D. +0.5 -0.1
carbon source D-Gluconic Acid (C) N.D. -0.3 N.D. +0.6 -0.0
r2a outgrowth control R2A outgrowth control N.D. +0.5 N.D. +0.1 -0.2
carbon source Fumarate (C) N.D. +0.4 N.D. +0.2 -0.2
carbon source L-Lactate (C) N.D. +0.4 N.D. +0.3 -0.2
carbon source D-Arabinose (C) N.D. +0.2 N.D. +0.4 -0.1
carbon source L-Asparagine (C) N.D. +0.5 N.D. +0.4 -0.1
carbon source D,L-Malic Acid (C) N.D. +0.4 N.D. +0.3 +0.1
carbon source L-Tryptophan (C) N.D. +0.3 N.D. +0.4 +0.1
carbon source Ethanol (C) N.D. +0.4 N.D. +0.3 +0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.5 N.D. +0.3 +0.0
carbon source L-Asparagine (C) N.D. +0.5 N.D. +0.5 +0.1
carbon source butyrate (C) N.D. +0.9 N.D. +0.4 +0.0
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