Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27320 and ABID97_RS27325 are separated by 131 nucleotidesABID97_RS27325 and ABID97_RS27330 overlap by 4 nucleotidesABID97_RS27330 and ABID97_RS27335 overlap by 4 nucleotidesABID97_RS27335 and ABID97_RS27340 overlap by 4 nucleotides ABID97_RS27320: ABID97_RS27320 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 377,590 to 379,734 _RS27320 ABID97_RS27325: ABID97_RS27325 - glucoamylase family protein, at 379,866 to 381,161 _RS27325 ABID97_RS27330: ABID97_RS27330 - glycoside hydrolase family 15 protein, at 381,158 to 382,543 _RS27330 ABID97_RS27335: ABID97_RS27335 - ABC transporter ATP-binding protein/permease, at 382,540 to 384,300 _RS27335 ABID97_RS27340: ABID97_RS27340 - CocE/NonD family hydrolase, at 384,297 to 386,582 _RS27340
Group Condition ABID97_RS27320 ABID97_RS27325 ABID97_RS27330 ABID97_RS27335 ABID97_RS27340
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 -0.1 +0.1 -0.9
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.1 +0.0 -0.3 -0.7
carbon source Formate (C) -0.1 -0.1 +0.0 -0.4 -0.2
carbon source D-Gluconic Acid (C) -0.2 +0.2 -0.0 -0.1 -0.4
carbon source D-Serine (C) -0.1 +0.4 +0.0 -0.6 -0.3
carbon source L-tyrosine (C) -0.1 +0.4 +0.2 -0.9 -0.1
carbon source L-tyrosine (C) +0.2 -0.1 +0.1 -0.1 -0.6
carbon source D-Sorbitol (C) -0.1 +0.1 -0.3 -0.3 +0.1
carbon source L-Histidine (C) +0.1 +0.1 -0.4 -0.4 +0.2
carbon source Adenine (C) +0.0 +0.4 +0.2 -0.1 -0.8
carbon source L-Histidine (C) +0.2 +0.3 -0.6 -0.3 +0.2
phage V2_1 +0.2 +0.2 -0.1 -0.3 -0.3
carbon source butyrate (C) +0.1 -0.2 -0.4 -0.1 +0.4
r2a outgrowth control R2A outgrowth control +0.1 -0.2 -0.4 +0.4 -0.2
carbon source D-Glucuronic Acid (C) +0.2 +0.2 -0.1 -0.1 -0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.2 +0.2 -0.2 -0.4 +0.1
carbon source L-Threonine (C) -0.1 +0.4 -0.0 +0.2 -0.6
phage V1_10 +0.4 -0.2 -0.1 -0.2 -0.1
carbon source D-Gluconic Acid (C) -0.2 +0.4 +0.0 -0.2 -0.2
carbon source Adenine (C) -0.0 +0.3 +0.2 +0.1 -0.5
carbon source Glucuronamide (C) -0.0 -0.2 +0.3 -0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.3 -0.1 +0.2 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +0.0 -0.4 -0.3 +0.6
carbon source L-Proline (C) +0.1 +0.0 -0.1 -0.2 +0.6
carbon source D,L-Malic Acid (C) +0.4 +0.4 +0.1 -0.4 +0.1
carbon source D-Ribose (C) +0.1 +0.4 +0.1 -0.2 +0.2
carbon source D-Mannose (C) +0.3 +0.3 +0.1 -0.1 +0.3
carbon source L-Glutamic (C) -0.0 +0.3 +0.2 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.2 -0.1 +0.5 +0.5
phage V2_100 +0.5 +0.3 +0.3 +0.3 +0.6
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ABID97_RS27320
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ABID97_RS27325
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ABID97_RS27335
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ABID97_RS27340
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