Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27285 and ABID97_RS27290 are separated by 102 nucleotidesABID97_RS27290 and ABID97_RS27295 overlap by 17 nucleotidesABID97_RS27295 and ABID97_RS27300 are separated by 94 nucleotidesABID97_RS27300 and ABID97_RS27305 are separated by 120 nucleotides ABID97_RS27285: ABID97_RS27285 - LysR family transcriptional regulator, at 370,626 to 371,519 _RS27285 ABID97_RS27290: ABID97_RS27290 - methyltransferase domain-containing protein, at 371,622 to 372,533 _RS27290 ABID97_RS27295: ABID97_RS27295 - SDR family oxidoreductase, at 372,517 to 373,308 _RS27295 ABID97_RS27300: ABID97_RS27300 - alpha/beta hydrolase, at 373,403 to 374,368 _RS27300 ABID97_RS27305: ABID97_RS27305 - LysR family transcriptional regulator, at 374,489 to 375,388 _RS27305
Group Condition ABID97_RS27285 ABID97_RS27290 ABID97_RS27295 ABID97_RS27300 ABID97_RS27305
carbon source L-tyrosine (C) -0.5 -2.8 N.D. +0.1 -0.0
carbon source Adenine (C) -0.4 -2.0 N.D. -0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -2.7 N.D. -0.1 +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.9 N.D. -0.4 -0.5
carbon source L-Alanine (C) -0.3 -1.7 N.D. +0.1 +0.3
carbon source D-Glucose (C) -0.4 -1.4 N.D. +0.0 +0.2
carbon source D-Mannose (C) -0.1 -1.1 N.D. -0.2 -0.1
phage V2_100 +0.2 -1.0 N.D. -0.2 -0.4
carbon source Gly-Glu (C) -0.3 -1.0 N.D. -0.3 +0.3
carbon source D-Gluconic Acid (C) +0.3 -0.7 N.D. -0.4 -0.2
carbon source D-Xylose (C) +0.1 -1.0 N.D. -0.2 +0.2
carbon source butyrate (C) -0.2 -1.0 N.D. +0.5 +0.5
carbon source L-Lactate (C) -0.1 +0.7 N.D. -0.1 -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +1.0 N.D. -0.3 -0.5
carbon source L-Leucine (C) -0.3 +1.0 N.D. -0.5 -0.2
r2a outgrowth control R2A outgrowth control +0.2 +1.2 N.D. -0.3 -1.0
carbon source D,L-Malic Acid (C) -0.1 +1.0 N.D. -0.3 -0.4
carbon source L-Threonine (C) +0.2 +0.7 N.D. -0.4 -0.2
phage V1_10 -0.4 +0.6 N.D. +0.0 +0.5
carbon source Glucuronamide (C) -0.4 +0.8 N.D. -0.0 +0.4
carbon source L-Alanine (C) -0.6 +1.1 N.D. -0.0 +0.3
carbon source L-Malic (C) -0.4 +1.3 N.D. +0.1 -0.1
carbon source succinate (C) -0.1 +1.4 N.D. -0.6 +0.1
carbon source butyrate (C) +0.2 +0.6 N.D. -0.4 +0.4
carbon source Formate (C) -0.1 +1.0 N.D. -0.3 +0.2
carbon source propionate (C) +0.4 +1.1 N.D. -0.0 -0.0
carbon source a-Ketoglutaric (C) -0.1 +1.0 N.D. -0.1 +0.7
carbon source L-Fucose (C) +0.3 +0.3 N.D. +0.2 +0.6
carbon source 2-Deoxy-D-Ribose (C) +0.1 +1.2 N.D. -0.3 +0.4
carbon source propionate (C) +0.2 +1.2 N.D. -0.0 +0.6
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ABID97_RS27285
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ABID97_RS27290
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ABID97_RS27300
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ABID97_RS27305
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