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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS27205 and ABID97_RS27210 are separated by 16 nucleotides
ABID97_RS27210 and ABID97_RS27215 are separated by 91 nucleotides
ABID97_RS27215 and ABID97_RS27220 are separated by 63 nucleotides
ABID97_RS27220 and ABID97_RS27225 are separated by 240 nucleotides
ABID97_RS27205: ABID97_RS27205 - hypothetical protein, at 358,737 to 358,961
_RS27205
ABID97_RS27210: ABID97_RS27210 - hypothetical protein, at 358,978 to 359,247
_RS27210
ABID97_RS27215: ABID97_RS27215 - NAD(+)--rifampin ADP-ribosyltransferase, at 359,339 to 359,734
_RS27215
ABID97_RS27220: ABID97_RS27220 - serine hydrolase domain-containing protein, at 359,798 to 361,687
_RS27220
ABID97_RS27225: ABID97_RS27225 - ester cyclase, at 361,928 to 362,347
_RS27225
Group
Condition
ABID97
_RS27205
ABID97
_RS27210
ABID97
_RS27215
ABID97
_RS27220
ABID97
_RS27225
carbon source
L-tyrosine (C)
N.D.
N.D.
-4.1
-0.7
N.D.
phage
V2_10
N.D.
N.D.
-1.8
-0.3
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
N.D.
N.D.
-1.6
-0.1
N.D.
carbon source
D-Arabinose (C)
N.D.
N.D.
-1.4
-0.2
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
N.D.
-0.7
-0.5
N.D.
carbon source
L-Alanine (C)
N.D.
N.D.
-1.3
+0.1
N.D.
carbon source
L-Threonine (C)
N.D.
N.D.
-0.6
-0.6
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
N.D.
-1.1
-0.1
N.D.
carbon source
D-Ribose (C)
N.D.
N.D.
-0.7
-0.3
N.D.
phage
V2_10
N.D.
N.D.
-0.7
-0.3
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
N.D.
+0.2
-1.1
N.D.
carbon source
D-Serine (C)
N.D.
N.D.
+0.7
-0.7
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
N.D.
+0.5
-0.6
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
+0.8
-0.5
N.D.
carbon source
L-Leucine (C)
N.D.
N.D.
+0.8
-0.4
N.D.
carbon source
L-Asparagine (C)
N.D.
N.D.
+0.9
-0.3
N.D.
carbon source
casaminos (C)
N.D.
N.D.
+0.9
-0.2
N.D.
carbon source
L-Glutamine (C)
N.D.
N.D.
+1.1
-0.4
N.D.
carbon source
D-Sorbitol (C)
N.D.
N.D.
+1.0
-0.4
N.D.
carbon source
L-Glutamine (C)
N.D.
N.D.
+1.0
-0.2
N.D.
plant outgrowth control
Plant outgrowth control
N.D.
N.D.
+1.0
+0.1
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
+0.9
+0.2
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
+1.2
-0.1
N.D.
carbon source
butyrate (C)
N.D.
N.D.
+0.9
+0.3
N.D.
carbon source
L-Tryptophan (C)
N.D.
N.D.
+0.9
+0.4
N.D.
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
N.D.
N.D.
+1.2
+0.1
N.D.
carbon source
D-Glucuronic Acid (C)
N.D.
N.D.
+1.2
+0.1
N.D.
carbon source
Adenine (C)
N.D.
N.D.
+1.0
+0.4
N.D.
carbon source
Glucuronamide (C)
N.D.
N.D.
+1.1
+0.3
N.D.
carbon source
L-Fucose (C)
N.D.
N.D.
+1.2
+0.4
N.D.
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