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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS27195 and ABID97_RS27200 are separated by 137 nucleotides
ABID97_RS27200 and ABID97_RS27205 are separated by 104 nucleotides
ABID97_RS27205 and ABID97_RS27210 are separated by 16 nucleotides
ABID97_RS27210 and ABID97_RS27215 are separated by 91 nucleotides
ABID97_RS27195: ABID97_RS27195 - hypothetical protein, at 357,956 to 358,183
_RS27195
ABID97_RS27200: ABID97_RS27200 - hypothetical protein, at 358,321 to 358,632
_RS27200
ABID97_RS27205: ABID97_RS27205 - hypothetical protein, at 358,737 to 358,961
_RS27205
ABID97_RS27210: ABID97_RS27210 - hypothetical protein, at 358,978 to 359,247
_RS27210
ABID97_RS27215: ABID97_RS27215 - NAD(+)--rifampin ADP-ribosyltransferase, at 359,339 to 359,734
_RS27215
Group
Condition
ABID97
_RS27195
ABID97
_RS27200
ABID97
_RS27205
ABID97
_RS27210
ABID97
_RS27215
carbon source
L-tyrosine (C)
-0.5
-0.1
N.D.
N.D.
-4.1
phage
V2_100
-3.6
+0.4
N.D.
N.D.
+0.5
carbon source
4-Hydroxybenzoic Acid (C)
-0.8
-0.6
N.D.
N.D.
-1.1
phage
V2_10
-0.7
+0.1
N.D.
N.D.
-1.8
carbon source
D-Arabinose (C)
-0.6
-0.4
N.D.
N.D.
-1.4
carbon source
D-Fructose (C)
-1.9
-0.3
N.D.
N.D.
-0.1
carbon source
L-Phenylalanine (C)
-1.5
-0.3
N.D.
N.D.
-0.3
carbon source
D-Ribose (C)
-0.5
-0.4
N.D.
N.D.
-0.6
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+0.4
-0.2
N.D.
N.D.
-1.6
carbon source
L-Alanine (C)
+0.0
+0.1
N.D.
N.D.
-1.3
phage
V2_10
-0.6
+0.3
N.D.
N.D.
-0.7
carbon source
Fumarate (C)
+0.4
-0.6
N.D.
N.D.
-0.5
carbon source
casaminos (C)
-1.3
-0.2
N.D.
N.D.
+0.9
carbon source
4-Hydroxybenzoic Acid (C)
+0.8
-0.6
N.D.
N.D.
-0.7
carbon source
L-Histidine (C)
-1.2
+0.3
N.D.
N.D.
+0.6
carbon source
Adenine (C)
-1.1
-0.2
N.D.
N.D.
+1.0
carbon source
Glucuronamide (C)
-0.8
-0.6
N.D.
N.D.
+1.1
carbon source
a-Ketoglutaric (C)
-0.8
+0.1
N.D.
N.D.
+0.9
carbon source
L-Tryptophan (C)
-0.4
-0.2
N.D.
N.D.
+0.9
carbon source
L-Arabinose (C)
+0.8
-0.2
N.D.
N.D.
-0.4
carbon source
L-Fucose (C)
-0.2
-0.6
N.D.
N.D.
+1.2
carbon source
D-Sorbitol (C)
-0.5
-0.0
N.D.
N.D.
+1.0
carbon source
butyrate (C)
-0.7
+0.3
N.D.
N.D.
+0.9
carbon source
L-Lactate (C)
+0.4
-0.4
N.D.
N.D.
+0.7
carbon source
D-Glucuronic Acid (C)
-0.2
-0.4
N.D.
N.D.
+1.2
carbon source
D-Gluconic Acid (C)
-0.2
-0.2
N.D.
N.D.
+1.2
carbon source
D-Mannose (C)
+1.3
-0.3
N.D.
N.D.
-0.1
carbon source
D-Glucose (C)
+0.4
-0.3
N.D.
N.D.
+0.8
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+0.3
-0.3
N.D.
N.D.
+1.2
r2a outgrowth control
R2A outgrowth control
+1.3
+0.3
N.D.
N.D.
+0.7
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