Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS27015 and ABID97_RS27020 are separated by 77 nucleotidesABID97_RS27020 and ABID97_RS27025 are separated by 88 nucleotidesABID97_RS27025 and ABID97_RS27030 are separated by 34 nucleotidesABID97_RS27030 and ABID97_RS27035 are separated by 87 nucleotides ABID97_RS27015: ABID97_RS27015 - DoxX family protein, at 322,239 to 322,724 _RS27015 ABID97_RS27020: ABID97_RS27020 - helix-turn-helix transcriptional regulator, at 322,802 to 323,608 _RS27020 ABID97_RS27025: ABID97_RS27025 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 323,697 to 324,722 _RS27025 ABID97_RS27030: ABID97_RS27030 - tripartite tricarboxylate transporter substrate binding protein, at 324,757 to 325,734 _RS27030 ABID97_RS27035: ABID97_RS27035 - nuclear transport factor 2 family protein, at 325,822 to 326,298 _RS27035
Group Condition ABID97_RS27015 ABID97_RS27020 ABID97_RS27025 ABID97_RS27030 ABID97_RS27035
carbon source L-tyrosine (C) -2.2 -0.3 +0.0 -0.8 +0.1
carbon source L-Fucose (C) -1.9 -0.2 -0.5 +0.1 +0.4
carbon source L-Arabinose (C) -1.3 -0.5 +0.1 -0.2 -0.0
carbon source L-Arabinose (C) -0.6 -0.7 -0.3 -0.6 +0.3
carbon source L-Proline (C) -0.8 -0.5 +0.1 -0.5 +0.0
carbon source pyruvate (C) -0.9 -0.5 -0.3 -0.2 +0.2
carbon source D-Serine (C) -1.3 +0.3 -0.3 -0.4 +0.2
carbon source D-Serine (C) -1.0 -0.4 -0.1 -0.1 +0.4
carbon source 2-Deoxy-D-Ribose (C) -1.5 -0.3 +0.1 +0.2 +0.3
carbon source L-Threonine (C) -1.4 -0.1 +0.0 -0.1 +0.4
carbon source Glycolic Acid (C) -0.9 -0.5 -0.2 +0.0 +0.6
carbon source Glucuronamide (C) -1.0 -0.6 -0.0 -0.2 +0.8
carbon source D-Mannose (C) -0.5 -0.7 -0.2 +0.2 +0.3
carbon source L-Alanine (C) -1.5 -0.4 -0.2 +0.3 +0.8
carbon source Ethanol (C) -1.2 -0.3 -0.2 +0.2 +0.7
carbon source casaminos (C) -0.6 -0.7 +0.1 +0.3 +0.2
r2a outgrowth control R2A outgrowth control -0.9 -0.5 +0.1 +0.1 +0.5
carbon source L-Lactate (C) -0.9 -0.6 +0.4 -0.1 +0.7
carbon source D-Galactose (C) -0.7 -0.3 -0.3 +0.1 +0.7
carbon source butyrate (C) -1.4 -0.3 +0.6 +0.1 +0.6
carbon source D-Glucose (C) -0.4 -0.4 +0.1 -0.7 +1.1
phage V2_100 -1.0 +0.4 +0.7 +0.3 -0.5
carbon source propionate (C) -0.5 -0.1 +0.1 -0.5 +0.8
carbon source Gly-Glu (C) -0.5 -0.5 +0.2 -0.1 +0.9
carbon source Glycerol (C) -0.7 -0.3 +0.2 +0.1 +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -1.0 -0.2 +0.3 +0.5
carbon source D-Galactose (C) -0.2 -0.7 +0.6 +0.0 +0.7
carbon source Adenine (C) +0.6 +0.4 -0.1 +0.2 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.4 -0.2 +1.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.5 +0.8 -0.6 +1.0 +0.4
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ABID97_RS27015
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ABID97_RS27035
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