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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS26970 and ABID97_RS26975 are separated by 75 nucleotides
ABID97_RS26975 and ABID97_RS26980 are separated by 103 nucleotides
ABID97_RS26980 and ABID97_RS26985 are separated by 28 nucleotides
ABID97_RS26985 and ABID97_RS26990 are separated by 13 nucleotides
ABID97_RS26970: ABID97_RS26970 - hypothetical protein, at 314,859 to 315,308
_RS26970
ABID97_RS26975: ABID97_RS26975 - LysR substrate-binding domain-containing protein, at 315,384 to 316,283
_RS26975
ABID97_RS26980: ABID97_RS26980 - mandelate racemase/muconate lactonizing enzyme family protein, at 316,387 to 317,553
_RS26980
ABID97_RS26985: ABID97_RS26985 - tripartite tricarboxylate transporter substrate binding protein BugD, at 317,582 to 318,559
_RS26985
ABID97_RS26990: ABID97_RS26990 - ornithine carbamoyltransferase, at 318,573 to 319,073
_RS26990
Group
Condition
ABID97
_RS26970
ABID97
_RS26975
ABID97
_RS26980
ABID97
_RS26985
ABID97
_RS26990
phage
V2_100
-0.1
-0.6
-0.4
-0.2
-3.2
carbon source
Ethanol (C)
+0.1
-0.2
-0.2
-0.2
-1.9
carbon source
L-Lactate (C)
-0.5
-0.1
-0.4
-0.3
-1.1
carbon source
propionate (C)
-0.2
-0.3
-0.2
+0.6
-2.1
carbon source
D-Lactate (C)
-0.2
-0.4
-0.5
-0.2
-0.9
carbon source
Glucuronamide (C)
-0.5
-0.4
-0.1
-0.3
-0.6
carbon source
L-Fucose (C)
-0.9
-0.0
-0.1
-0.3
-0.5
carbon source
D-Fructose (C)
-0.1
+0.2
+0.0
-0.1
-1.8
carbon source
D-Fructose (C)
-0.4
-0.5
-0.3
-0.1
-0.4
carbon source
L-tyrosine (C)
-0.5
-0.3
-0.9
-0.3
+0.3
carbon source
Formate (C)
-0.1
+0.1
-0.3
-0.2
-1.2
carbon source
L-Asparagine (C)
-0.2
-0.2
-0.3
+0.1
-0.8
carbon source
L-Alanine (C)
+0.2
-0.2
-0.5
+0.1
-1.1
carbon source
casaminos (C)
-0.3
-0.1
+0.2
+0.1
-1.1
carbon source
D-Arabinose (C)
-0.8
+0.4
-0.3
-0.2
-0.3
carbon source
D-Galactose (C)
-0.7
-0.6
-0.2
+0.1
+0.3
carbon source
L-Glutamine (C)
+0.2
-0.2
-0.1
+0.1
-1.1
carbon source
Gly-Glu (C)
-0.3
-0.4
-0.3
+0.4
-0.4
carbon source
D,L-Malic Acid (C)
+0.1
-0.9
-0.5
-0.1
+0.3
carbon source
L-Lactate (C)
+0.1
+0.1
-0.1
+0.2
-1.2
carbon source
L-Leucine (C)
-0.2
-0.4
-0.3
+0.5
-0.2
carbon source
Ethanol (C)
+0.2
-0.7
-0.6
+0.2
+0.2
carbon source
a-Ketoglutaric (C)
-0.6
-0.5
-0.5
+0.7
+0.3
carbon source
butyrate (C)
+0.0
+0.6
-0.1
-0.1
-0.9
carbon source
Formate (C)
-0.2
+0.0
+0.0
+0.6
-0.9
carbon source
L-Asparagine (C)
+0.3
+0.3
-0.2
+0.4
-1.1
carbon source
D-Mannose (C)
-0.4
-0.3
-0.0
-0.3
+0.7
r2a outgrowth control
R2A outgrowth control
+0.0
+0.0
-0.4
-0.6
+0.9
carbon source
propionate (C)
+0.2
+0.2
-0.2
-0.4
+0.6
carbon source
4-Hydroxybenzoic Acid (C)
+0.1
+0.3
-0.2
+0.7
+0.7
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