Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS26705 and ABID97_RS26710 are separated by 91 nucleotidesABID97_RS26710 and ABID97_RS26715 are separated by 64 nucleotidesABID97_RS26715 and ABID97_RS26720 are separated by 55 nucleotidesABID97_RS26720 and ABID97_RS26725 are separated by 129 nucleotides ABID97_RS26705: ABID97_RS26705 - tetratricopeptide repeat protein, at 265,061 to 265,903 _RS26705 ABID97_RS26710: ABID97_RS26710 - Ku protein, at 265,995 to 266,933 _RS26710 ABID97_RS26715: ABID97_RS26715 - DUF4337 domain-containing protein, at 266,998 to 267,630 _RS26715 ABID97_RS26720: ABID97_RS26720 - LysR substrate-binding domain-containing protein, at 267,686 to 268,630 _RS26720 ABID97_RS26725: ABID97_RS26725 - amidase, at 268,760 to 270,217 _RS26725
Group Condition ABID97_RS26705 ABID97_RS26710 ABID97_RS26715 ABID97_RS26720 ABID97_RS26725
carbon source L-tyrosine (C) -0.7 -0.3 +0.1 N.D. -0.0
carbon source Glycolic Acid (C) -0.2 -0.1 -0.3 N.D. -0.3
phage V1_10 -0.1 -0.4 -0.2 N.D. +0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.4 -0.4 N.D. +0.1
carbon source D-Glucose (C) -0.3 -0.3 -0.2 N.D. +0.2
carbon source Glucuronamide (C) +0.1 -0.4 -0.3 N.D. -0.1
carbon source Tween 20 (C) -0.2 -0.3 +0.1 N.D. -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.5 +0.2 +0.2 N.D. -0.5
carbon source D,L-Malic Acid (C) -0.0 -0.4 +0.2 N.D. -0.2
carbon source D-Glucuronic Acid (C) -0.2 +0.2 -0.0 N.D. -0.4
carbon source L-Arabinose (C) -0.2 +0.0 +0.2 N.D. -0.5
carbon source Ethanol (C) -0.2 +0.1 +0.1 N.D. -0.3
carbon source L-Glutamic (C) +0.2 -0.2 +0.0 N.D. -0.3
carbon source D-Xylose (C) -0.3 +0.1 +0.1 N.D. -0.2
carbon source L-tyrosine (C) +0.1 +0.3 -0.0 N.D. -0.5
carbon source D-Gluconic Acid (C) -0.3 +0.1 +0.3 N.D. -0.2
phage V2_1 -0.2 -0.2 -0.0 N.D. +0.5
carbon source L-Histidine (C) -0.6 +0.4 -0.1 N.D. +0.3
carbon source butyrate (C) +0.5 -0.3 +0.0 N.D. -0.1
carbon source butyrate (C) +0.4 -0.3 +0.1 N.D. -0.1
carbon source acetate (C) +0.1 -0.3 +0.2 N.D. +0.2
phage V1_10 -0.0 -0.2 +0.1 N.D. +0.4
r2a outgrowth control R2A outgrowth control +0.4 -0.2 +0.1 N.D. +0.1
carbon source L-Phenylalanine (C) -0.2 +0.4 +0.1 N.D. +0.1
carbon source D-Lactate (C) +0.4 -0.1 -0.0 N.D. +0.2
carbon source D-Sorbitol (C) -0.1 -0.0 +0.4 N.D. +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +0.5 +0.0 N.D. +0.1
carbon source Gly-Glu (C) +0.1 +0.4 +0.1 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.9 +0.2 N.D. -0.8
carbon source propionate (C) +0.1 +0.3 +0.2 N.D. +1.6
remove
ABID97_RS26705
plot		 remove
ABID97_RS26710
plot		 remove
ABID97_RS26715		 remove
ABID97_RS26720
plot		 remove
ABID97_RS26725
plot