Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS26665 and ABID97_RS26670 are separated by 24 nucleotidesABID97_RS26670 and ABID97_RS26675 are separated by 85 nucleotidesABID97_RS26675 and ABID97_RS26680 overlap by 4 nucleotidesABID97_RS26680 and ABID97_RS26685 are separated by 31 nucleotides ABID97_RS26665: ABID97_RS26665 - DUF1801 domain-containing protein, at 255,634 to 256,011 _RS26665 ABID97_RS26670: ABID97_RS26670 - DUF1801 domain-containing protein, at 256,036 to 256,461 _RS26670 ABID97_RS26675: ABID97_RS26675 - DNA repair exonuclease, at 256,547 to 257,707 _RS26675 ABID97_RS26680: ABID97_RS26680 - AAA family ATPase, at 257,704 to 260,367 _RS26680 ABID97_RS26685: ABID97_RS26685 - LysR substrate-binding domain-containing protein, at 260,399 to 261,334 _RS26685
Group Condition ABID97_RS26665 ABID97_RS26670 ABID97_RS26675 ABID97_RS26680 ABID97_RS26685
carbon source L-Arabinose (C) N.D. -0.5 +0.1 -1.5 -1.0
carbon source D-Serine (C) N.D. -1.0 -0.7 +0.0 -0.3
carbon source Glucuronamide (C) N.D. +0.2 -0.4 -0.9 -0.5
carbon source D-Arabinose (C) N.D. -0.4 +0.2 -1.1 -0.3
carbon source D-Xylose (C) N.D. -0.6 -0.3 -0.4 -0.4
carbon source D-Fructose (C) N.D. +0.0 -0.2 -1.5 +0.3
carbon source L-Glutamic (C) N.D. -0.1 +0.1 -0.8 -0.5
carbon source Adenine (C) N.D. -0.3 +0.3 -0.4 -1.0
carbon source L-Proline (C) N.D. -0.7 -0.1 +0.2 -0.6
carbon source D,L-Malic Acid (C) N.D. +0.3 -0.5 -0.3 -0.3
control NP N.D. +0.4 +0.3 -0.8 -0.6
carbon source L-Alanine (C) N.D. +0.7 -0.3 -1.1 +0.0
carbon source D-Sorbitol (C) N.D. +0.5 +0.0 -0.9 -0.2
carbon source D-Gluconic Acid (C) N.D. -0.5 +0.1 -0.5 +0.5
carbon source D-Mannose (C) N.D. -0.3 -0.5 +0.6 -0.2
carbon source L-Fucose (C) N.D. +0.5 -0.1 -0.8 +0.1
carbon source pyruvate (C) N.D. +0.1 -0.1 +0.6 -0.8
carbon source Formate (C) N.D. -0.9 -0.1 +0.5 +0.3
phage V1_10 N.D. +0.4 +0.2 +0.2 -0.8
carbon source L-Phenylalanine (C) N.D. -0.9 +0.3 +0.4 +0.3
phage V1_1 N.D. +0.7 +0.2 -0.4 -0.3
r2a outgrowth control R2A outgrowth control N.D. -0.8 +0.3 +0.8 -0.1
phage V2_10 N.D. +0.6 -0.1 +0.5 -0.7
carbon source L-tyrosine (C) N.D. +0.1 +0.2 +1.2 -1.2
phage V1_10 N.D. +0.4 +0.1 +0.6 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.1 +0.3 +0.7 +0.6
carbon source butyrate (C) N.D. +0.4 -0.0 +1.1 -0.9
r2a outgrowth control R2A outgrowth control N.D. -1.1 -0.0 +1.1 +0.7
plant outgrowth control Plant outgrowth control N.D. +0.4 -0.3 +0.8 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.7 +0.2 +1.0 +0.9
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ABID97_RS26665
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