Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS26490 and ABID97_RS26495 overlap by 4 nucleotidesABID97_RS26495 and ABID97_RS26500 are separated by 100 nucleotidesABID97_RS26500 and ABID97_RS26505 are separated by 170 nucleotidesABID97_RS26505 and ABID97_RS26510 are separated by 188 nucleotides ABID97_RS26490: ABID97_RS26490 - aspartate/glutamate racemase family protein, at 216,608 to 217,300 _RS26490 ABID97_RS26495: ABID97_RS26495 - Lrp/AsnC family transcriptional regulator, at 217,297 to 217,773 _RS26495 ABID97_RS26500: ABID97_RS26500 - saccharopine dehydrogenase C-terminal domain-containing protein, at 217,874 to 219,007 _RS26500 ABID97_RS26505: ABID97_RS26505 - DUF899 domain-containing protein, at 219,178 to 219,960 _RS26505 ABID97_RS26510: ABID97_RS26510 - NUDIX hydrolase, at 220,149 to 220,598 _RS26510
Group Condition ABID97_RS26490 ABID97_RS26495 ABID97_RS26500 ABID97_RS26505 ABID97_RS26510
carbon source 2-Deoxy-D-Ribose (C) -2.7 -0.2 +0.1 +0.3 -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 +0.0 +0.3 -0.0 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.3 -0.2 -0.1 -1.4
carbon source L-Histidine (C) -0.3 -0.5 -0.4 -0.0 -0.9
carbon source a-Ketoglutaric (C) -2.5 +0.0 +0.3 +0.1 +0.1
carbon source casaminos (C) -0.4 -0.5 -0.5 -0.2 -0.6
carbon source L-Glutamine (C) -1.1 +0.0 +0.2 -0.0 -1.0
carbon source L-Alanine (C) -0.7 -0.1 -0.1 -0.3 -0.6
phage V2_10 -0.4 +0.5 -0.0 -0.1 -1.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -0.4 -0.5 -0.0 +0.0
carbon source Ethanol (C) -1.7 -0.3 +0.4 +0.0 -0.3
phage V1_10 -1.5 +0.1 +0.2 -0.1 -0.5
carbon source L-Histidine (C) -0.4 -0.5 -0.1 +0.2 -0.9
carbon source Tween 20 (C) -0.4 -0.1 -0.2 +0.2 -1.0
carbon source Formate (C) -1.2 +0.2 -0.2 +0.1 -0.3
carbon source L-Phenylalanine (C) -0.2 +0.2 +0.3 -0.2 -1.1
carbon source L-Fucose (C) -1.0 +0.3 +0.1 +0.0 -0.5
phage V1_1 -0.8 +0.5 +0.7 -0.1 -0.9
carbon source Formate (C) -0.8 +0.4 +0.3 +0.0 -0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.8 -0.6 +0.2 +0.1
phage V1_1 -1.4 +0.1 +0.7 -0.1 +0.0
carbon source propionate (C) +0.3 -0.1 -0.2 +0.4 -1.1
carbon source L-tyrosine (C) -0.9 -0.3 +0.6 -0.1 +0.2
carbon source D,L-Malic Acid (C) -0.8 -0.1 -0.4 -0.0 +0.9
carbon source acetate (C) -1.1 -0.1 +0.1 +0.1 +0.5
control NP -0.2 +0.3 +0.7 -0.1 -0.6
phage V2_100 +1.6 -0.3 +0.1 -0.4 +0.2
carbon source D-Ribose (C) +0.4 -0.3 +0.6 +0.3 +0.5
carbon source butyrate (C) +0.9 -0.1 +0.5 +0.2 +0.5
carbon source L-tyrosine (C) +0.8 +1.0 +0.2 +0.1 +0.3
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ABID97_RS26490
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