Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS26475 and ABID97_RS26480 overlap by 23 nucleotidesABID97_RS26480 and ABID97_RS26485 are separated by 122 nucleotidesABID97_RS26485 and ABID97_RS26490 are separated by 15 nucleotidesABID97_RS26490 and ABID97_RS26495 overlap by 4 nucleotides ABID97_RS26475: ABID97_RS26475 - substrate-binding domain-containing protein, at 212,885 to 213,727 _RS26475 ABID97_RS26480: ABID97_RS26480 - methanol/ethanol family PQQ-dependent dehydrogenase, at 213,705 to 215,519 _RS26480 ABID97_RS26485: ABID97_RS26485 - cytochrome c oxidase assembly protein, at 215,642 to 216,592 _RS26485 ABID97_RS26490: ABID97_RS26490 - aspartate/glutamate racemase family protein, at 216,608 to 217,300 _RS26490 ABID97_RS26495: ABID97_RS26495 - Lrp/AsnC family transcriptional regulator, at 217,297 to 217,773 _RS26495
Group Condition ABID97_RS26475 ABID97_RS26480 ABID97_RS26485 ABID97_RS26490 ABID97_RS26495
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.2 -0.9 -1.9 +0.0
carbon source a-Ketoglutaric (C) -0.3 +0.0 +0.0 -2.5 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.1 +0.2 -2.7 -0.2
carbon source butyrate (C) -0.1 +0.2 -0.8 -0.9 -0.5
phage V1_1 -0.1 -0.1 -0.3 -1.4 +0.1
carbon source Glucuronamide (C) -0.3 -0.1 -0.4 -1.2 +0.3
carbon source D-Arabinose (C) -0.5 +0.1 -0.7 -0.5 -0.1
carbon source Ethanol (C) +0.3 -0.1 +0.3 -1.7 -0.3
carbon source D-Arabinose (C) -0.2 -0.0 -0.2 -1.1 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.2 -0.2 -1.0 -0.4
carbon source D-Glucose (C) -0.2 -0.1 +0.1 -1.1 -0.1
phage V1_10 +0.1 -0.0 +0.3 -1.5 +0.1
carbon source L-Fucose (C) -0.2 -0.0 -0.2 -1.0 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.1 -0.5 +0.5 -0.8
carbon source D-Lactate (C) -0.2 -0.0 +0.3 -1.1 -0.0
carbon source L-tyrosine (C) -0.1 +0.1 +0.3 -0.9 -0.3
carbon source Formate (C) -0.4 -0.0 +0.5 -1.2 +0.2
carbon source acetate (C) -0.3 +0.0 +0.5 -1.1 -0.1
carbon source D,L-Lactate (C) -0.3 +0.0 +0.4 -0.8 -0.1
carbon source D-Ribose (C) +0.2 +0.1 -1.1 +0.4 -0.3
carbon source L-Alanine (C) -0.5 -0.0 +0.7 -0.7 +0.1
carbon source Formate (C) -0.4 +0.1 +0.2 -0.8 +0.4
carbon source L-Alanine (C) -0.2 -0.1 +0.8 -0.7 -0.1
phage V1_1 +0.1 -0.1 +0.3 -0.8 +0.5
carbon source L-Arabinose (C) -0.1 +0.1 +0.6 -0.7 +0.3
carbon source Tween 20 (C) +0.6 +0.1 +0.4 -0.4 -0.1
carbon source propionate (C) -0.5 +0.2 +0.5 +0.3 -0.1
carbon source butyrate (C) -0.5 +0.2 +0.4 +0.9 -0.1
phage V2_100 -0.3 -0.0 +0.1 +1.6 -0.3
carbon source L-tyrosine (C) -0.0 +0.1 -0.1 +0.8 +1.0
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ABID97_RS26475
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ABID97_RS26480
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ABID97_RS26490
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ABID97_RS26495
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