Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS26420 and ABID97_RS26425 are separated by 242 nucleotidesABID97_RS26425 and ABID97_RS26430 are separated by 31 nucleotidesABID97_RS26430 and ABID97_RS26435 overlap by 11 nucleotidesABID97_RS26435 and ABID97_RS26440 are separated by 45 nucleotides ABID97_RS26420: ABID97_RS26420 - copper-binding protein, at 203,572 to 203,886 _RS26420 ABID97_RS26425: ABID97_RS26425 - ABC transporter ATP-binding protein, at 204,129 to 204,629 _RS26425 ABID97_RS26430: ABID97_RS26430 - SDR family oxidoreductase, at 204,661 to 205,362 _RS26430 ABID97_RS26435: ABID97_RS26435 - tripartite tricarboxylate transporter substrate binding protein, at 205,352 to 206,323 _RS26435 ABID97_RS26440: ABID97_RS26440 - dihydrodipicolinate synthase family protein, at 206,369 to 207,307 _RS26440
Group Condition ABID97_RS26420 ABID97_RS26425 ABID97_RS26430 ABID97_RS26435 ABID97_RS26440
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.8 N.D. +0.3 N.D.
r2a outgrowth control R2A outgrowth control N.D. -0.3 N.D. -0.4 N.D.
carbon source L-Arabinose (C) N.D. +0.2 N.D. -0.4 N.D.
carbon source D-Galactose (C) N.D. +0.2 N.D. -0.3 N.D.
carbon source Glycolic Acid (C) N.D. -0.3 N.D. +0.4 N.D.
carbon source Glucuronamide (C) N.D. -0.4 N.D. +0.5 N.D.
phage V1_1 N.D. +0.4 N.D. -0.3 N.D.
carbon source L-Leucine (C) N.D. -0.2 N.D. +0.4 N.D.
carbon source L-Asparagine (C) N.D. -0.1 N.D. +0.5 N.D.
carbon source butyrate (C) N.D. +0.6 N.D. -0.2 N.D.
carbon source D-Glucose (C) N.D. +0.6 N.D. -0.1 N.D.
phage V2_10 N.D. +0.6 N.D. -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.6 N.D. -0.0 N.D.
carbon source L-Lactate (C) N.D. +0.6 N.D. -0.1 N.D.
carbon source Fumarate (C) N.D. +0.3 N.D. +0.3 N.D.
carbon source D-Serine (C) N.D. +0.4 N.D. +0.2 N.D.
carbon source D-Fructose (C) N.D. +0.3 N.D. +0.3 N.D.
carbon source D,L-Lactate (C) N.D. +0.2 N.D. +0.5 N.D.
phage V2_10 N.D. +0.6 N.D. +0.0 N.D.
carbon source Ethanol (C) N.D. +0.2 N.D. +0.4 N.D.
phage V2_1 N.D. +0.5 N.D. +0.1 N.D.
carbon source L-Histidine (C) N.D. +0.2 N.D. +0.5 N.D.
carbon source pyruvate (C) N.D. +0.6 N.D. +0.1 N.D.
carbon source Gly-Glu (C) N.D. +0.5 N.D. +0.2 N.D.
carbon source L-tyrosine (C) N.D. +1.0 N.D. -0.3 N.D.
carbon source D-Glucose (C) N.D. +0.7 N.D. +0.2 N.D.
carbon source D-Sorbitol (C) N.D. +0.5 N.D. +0.4 N.D.
phage V1_10 N.D. +1.1 N.D. -0.1 N.D.
carbon source D-Sorbitol (C) N.D. +0.7 N.D. +0.3 N.D.
carbon source propionate (C) N.D. +0.3 N.D. +2.3 N.D.
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ABID97_RS26420
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ABID97_RS26425
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ABID97_RS26440
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