Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS26305 and ABID97_RS26310 are separated by 351 nucleotidesABID97_RS26310 and ABID97_RS26315 are separated by 20 nucleotidesABID97_RS26315 and ABID97_RS26320 overlap by 4 nucleotidesABID97_RS26320 and ABID97_RS26325 are separated by 6 nucleotides ABID97_RS26305: ABID97_RS26305 - response regulator, at 184,947 to 185,336 _RS26305 ABID97_RS26310: ABID97_RS26310 - PAS domain-containing protein, at 185,688 to 187,202 _RS26310 ABID97_RS26315: ABID97_RS26315 - malonic semialdehyde reductase, at 187,223 to 187,813 _RS26315 ABID97_RS26320: ABID97_RS26320 - alpha/beta hydrolase fold domain-containing protein, at 187,810 to 188,646 _RS26320 ABID97_RS26325: ABID97_RS26325 - 4-hydroxy-tetrahydrodipicolinate synthase, at 188,653 to 189,546 _RS26325
Group Condition ABID97_RS26305 ABID97_RS26310 ABID97_RS26315 ABID97_RS26320 ABID97_RS26325
carbon source D,L-Malic Acid (C) N.D. -0.4 -0.8 -0.2 -0.3
carbon source L-Arabinose (C) N.D. -0.5 -0.2 -0.2 -0.3
r2a outgrowth control R2A outgrowth control N.D. +0.0 -0.1 -0.1 -0.9
carbon source D-Galactose (C) N.D. +0.1 -0.3 -0.2 -0.4
carbon source D-Glucuronic Acid (C) N.D. +0.4 -0.5 -0.0 -0.4
carbon source D-Sorbitol (C) N.D. -0.1 -0.8 +0.3 -0.1
carbon source L-Tryptophan (C) N.D. +0.2 -0.3 -0.2 -0.3
carbon source Tween 20 (C) N.D. +0.1 +0.1 -0.2 -0.5
carbon source L-Glutamic (C) N.D. +0.4 -0.2 -0.1 -0.4
phage V2_10 N.D. +0.3 -0.1 -0.2 -0.3
carbon source a-Ketoglutaric (C) N.D. +0.3 -0.2 -0.2 -0.2
carbon source L-Leucine (C) N.D. +0.2 -0.5 -0.1 +0.1
carbon source Glycerol (C) N.D. +0.3 +0.2 -0.6 -0.0
carbon source D-Sorbitol (C) N.D. +0.3 -0.7 +0.1 +0.2
carbon source D-Gluconic Acid (C) N.D. +0.2 +0.4 -0.4 -0.2
carbon source L-Proline (C) N.D. +0.2 +0.1 -0.4 +0.2
carbon source L-Histidine (C) N.D. -0.4 +0.5 -0.0 +0.1
carbon source L-Asparagine (C) N.D. +0.0 +0.5 -0.2 -0.3
carbon source D-Xylose (C) N.D. +0.4 +0.4 -0.2 -0.1
carbon source Glycerol (C) N.D. +0.1 +0.3 -0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 +0.5 +0.2 -0.2
carbon source Glucuronamide (C) N.D. -0.1 +0.9 +0.2 -0.4
carbon source Glycolic Acid (C) N.D. +0.5 -0.1 +0.2 +0.3
carbon source Gly-Glu (C) N.D. +0.4 +0.2 +0.1 +0.1
carbon source D-Galactose (C) N.D. +0.7 +0.3 -0.1 -0.1
carbon source butyrate (C) N.D. +0.3 +0.4 -0.2 +0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 +0.6 -0.1 +0.5
phage V2_10 N.D. +0.6 +0.8 -0.2 +0.1
phage V2_100 N.D. +1.5 +0.5 +0.2 +0.3
carbon source L-Alanine (C) N.D. +0.1 +3.6 -0.1 -0.2
remove
ABID97_RS26305
plot		 remove
ABID97_RS26310
plot		 remove
ABID97_RS26315		 remove
ABID97_RS26320
plot		 remove
ABID97_RS26325
plot