Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS26220 and ABID97_RS26225 are separated by 256 nucleotidesABID97_RS26225 and ABID97_RS26230 are separated by 136 nucleotidesABID97_RS26230 and ABID97_RS26235 overlap by 4 nucleotidesABID97_RS26235 and ABID97_RS26240 are separated by 37 nucleotides ABID97_RS26220: ABID97_RS26220 - hypothetical protein, at 169,332 to 169,748 _RS26220 ABID97_RS26225: ABID97_RS26225 - zinc-dependent alcohol dehydrogenase family protein, at 170,005 to 170,988 _RS26225 ABID97_RS26230: ABID97_RS26230 - LysR family transcriptional regulator, at 171,125 to 172,042 _RS26230 ABID97_RS26235: ABID97_RS26235 - SLAC1 anion channel family protein, at 172,039 to 173,034 _RS26235 ABID97_RS26240: ABID97_RS26240 - SDR family NAD(P)-dependent oxidoreductase, at 173,072 to 174,082 _RS26240
Group Condition ABID97_RS26220 ABID97_RS26225 ABID97_RS26230 ABID97_RS26235 ABID97_RS26240
carbon source Glucuronamide (C) N.D. -0.4 -0.4 -0.6 -0.3
r2a outgrowth control R2A outgrowth control N.D. -0.7 -0.6 +0.0 -0.3
r2a outgrowth control R2A outgrowth control N.D. -0.2 -0.1 -0.1 -0.3
carbon source L-tyrosine (C) N.D. -0.1 +0.3 -0.5 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.3 -0.1 +0.1 -0.2
carbon source L-Arabinose (C) N.D. -0.4 +0.1 -0.3 +0.1
plant outgrowth control Plant outgrowth control N.D. -0.3 -0.0 -0.2 +0.2
carbon source D-Xylose (C) N.D. -0.1 -0.2 +0.4 -0.3
carbon source L-tyrosine (C) N.D. -0.1 -0.3 +0.4 +0.0
carbon source butyrate (C) N.D. -0.3 +0.1 +0.2 +0.2
carbon source L-Threonine (C) N.D. +0.1 +0.2 +0.3 -0.2
carbon source succinate (C) N.D. -0.0 +0.3 +0.5 -0.3
carbon source L-Alanine (C) N.D. +0.3 -0.5 +0.9 -0.2
carbon source D-Ribose (C) N.D. -0.3 +0.2 +0.5 +0.1
carbon source D,L-Lactate (C) N.D. +0.2 +0.3 +0.4 -0.2
carbon source L-Glutamic (C) N.D. -0.1 +0.4 +0.1 +0.2
carbon source propionate (C) N.D. +0.2 +0.3 -0.4 +0.5
carbon source L-Phenylalanine (C) N.D. +0.2 +0.1 +0.5 -0.2
carbon source Fumarate (C) N.D. -0.3 +0.2 +0.3 +0.5
carbon source Ethanol (C) N.D. -0.0 +0.2 +0.3 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.1 +0.4 +0.5 +0.0
carbon source L-Glutamine (C) N.D. -0.0 +0.2 +0.3 +0.3
carbon source butyrate (C) N.D. +0.2 +0.3 +0.3 -0.1
carbon source D-Sorbitol (C) N.D. +0.0 +0.3 +0.3 +0.2
carbon source D-Serine (C) N.D. +0.1 +0.2 +0.5 +0.2
carbon source Glycolic Acid (C) N.D. +0.2 +0.2 +0.4 +0.1
phage V2_10 N.D. +0.4 +0.6 +0.3 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.9 +0.7 -0.2 +0.2
phage V2_100 N.D. +0.5 +0.4 +0.6 +0.2
carbon source propionate (C) N.D. +0.0 -0.1 +1.8 +0.2
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ABID97_RS26220
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