Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS26110 and ABID97_RS26115 are separated by 108 nucleotidesABID97_RS26115 and ABID97_RS26120 are separated by 51 nucleotidesABID97_RS26120 and ABID97_RS26125 are separated by 242 nucleotidesABID97_RS26125 and ABID97_RS26130 are separated by 56 nucleotides ABID97_RS26110: ABID97_RS26110 - coniferyl aldehyde dehydrogenase, at 145,950 to 147,401 _RS26110 ABID97_RS26115: ABID97_RS26115 - hypothetical protein, at 147,510 to 147,854 _RS26115 ABID97_RS26120: ABID97_RS26120 - hypothetical protein, at 147,906 to 149,237 _RS26120 ABID97_RS26125: ABID97_RS26125 - ABC transporter substrate-binding protein, at 149,480 to 150,412 _RS26125 ABID97_RS26130: ABID97_RS26130 - amino acid ABC transporter permease/ATP-binding protein, at 150,469 to 152,115 _RS26130
Group Condition ABID97_RS26110 ABID97_RS26115 ABID97_RS26120 ABID97_RS26125 ABID97_RS26130
carbon source L-Fucose (C) -0.4 N.D. -0.2 -0.3 N.D.
phage V2_1 -0.2 N.D. -0.2 -0.2 N.D.
carbon source D-Galactose (C) -0.5 N.D. -0.1 -0.1 N.D.
carbon source butyrate (C) -0.6 N.D. +0.1 +0.0 N.D.
carbon source Glucuronamide (C) -0.4 N.D. +0.1 -0.1 N.D.
carbon source casaminos (C) -0.7 N.D. +0.2 +0.2 N.D.
r2a outgrowth control R2A outgrowth control +0.3 N.D. -0.2 -0.3 N.D.
carbon source L-Glutamine (C) -0.4 N.D. +0.2 +0.1 N.D.
carbon source D-Fructose (C) -0.4 N.D. +0.3 -0.0 N.D.
carbon source a-Ketoglutaric (C) -0.4 N.D. -0.0 +0.3 N.D.
carbon source L-Phenylalanine (C) -0.3 N.D. +0.2 +0.2 N.D.
plant outgrowth control Plant outgrowth control +0.4 N.D. -0.0 -0.4 N.D.
carbon source D,L-Malic Acid (C) -0.3 N.D. +0.3 -0.0 N.D.
carbon source L-Histidine (C) -0.2 N.D. +0.4 -0.1 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 N.D. +0.6 -0.3 N.D.
carbon source D-Sorbitol (C) -0.5 N.D. +0.5 +0.2 N.D.
carbon source D-Arabinose (C) -0.3 N.D. +0.4 +0.2 N.D.
carbon source D-Mannose (C) -0.3 N.D. +0.5 +0.2 N.D.
carbon source L-Alanine (C) -0.2 N.D. +0.4 +0.2 N.D.
carbon source Ethanol (C) -0.1 N.D. +0.6 -0.0 N.D.
carbon source Tween 20 (C) +0.1 N.D. +0.3 +0.3 N.D.
carbon source L-Phenylalanine (C) +0.4 N.D. +0.3 +0.1 N.D.
carbon source propionate (C) +0.6 N.D. -0.0 +0.1 N.D.
carbon source acetate (C) +0.3 N.D. +0.5 -0.1 N.D.
carbon source L-Leucine (C) +0.2 N.D. +0.5 +0.1 N.D.
carbon source D-Lactate (C) +0.3 N.D. +0.3 +0.2 N.D.
carbon source L-Asparagine (C) +0.3 N.D. +0.4 +0.3 N.D.
carbon source L-Lactate (C) -0.0 N.D. +0.6 +0.3 N.D.
carbon source propionate (C) +0.3 N.D. +0.6 -0.0 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 N.D. +0.1 +0.2 N.D.
remove
ABID97_RS26110
plot		 remove
ABID97_RS26115
plot		 remove
ABID97_RS26120		 remove
ABID97_RS26125
plot		 remove
ABID97_RS26130
plot