Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS26075 and ABID97_RS26080 are separated by 43 nucleotidesABID97_RS26080 and ABID97_RS26085 overlap by 4 nucleotidesABID97_RS26085 and ABID97_RS26090 are separated by 232 nucleotidesABID97_RS26090 and ABID97_RS26095 are separated by 142 nucleotides ABID97_RS26075: ABID97_RS26075 - hypothetical protein, at 139,379 to 140,083 _RS26075 ABID97_RS26080: ABID97_RS26080 - LytTR family DNA-binding domain-containing protein, at 140,127 to 140,921 _RS26080 ABID97_RS26085: ABID97_RS26085 - histidine kinase, at 140,918 to 141,982 _RS26085 ABID97_RS26090: ABID97_RS26090 - homoserine O-acetyltransferase, at 142,215 to 143,396 _RS26090 ABID97_RS26095: ABID97_RS26095 - SRPBCC family protein, at 143,539 to 143,988 _RS26095
Group Condition ABID97_RS26075 ABID97_RS26080 ABID97_RS26085 ABID97_RS26090 ABID97_RS26095
carbon source Glucuronamide (C) +0.1 -0.9 -0.3 -0.3 -0.3
carbon source Glycolic Acid (C) -0.7 +0.1 -0.4 -0.3 -0.3
carbon source D-Glucose (C) +0.0 -0.6 -0.6 +0.2 -0.3
phage V2_100 -0.2 +0.1 -0.6 -0.5 +0.3
carbon source butyrate (C) +0.8 -0.6 -0.4 -0.4 -0.2
plant outgrowth control Plant outgrowth control +0.5 -0.0 -0.3 -0.2 -0.3
carbon source L-Threonine (C) +0.4 -0.7 +0.3 -0.1 -0.1
phage V2_1 -0.5 -0.1 -0.4 +0.3 +0.4
carbon source L-Malic (C) -0.9 +0.1 +0.3 +0.0 +0.2
carbon source D-Ribose (C) -0.2 +0.3 -0.2 -0.5 +0.5
carbon source L-Alanine (C) +0.1 +0.0 -1.2 +0.7 +0.4
carbon source D-Glucose (C) +0.1 -0.2 -0.5 +0.1 +0.6
phage V2_10 +0.7 -0.1 -0.6 -0.0 +0.2
carbon source L-Histidine (C) +0.3 +0.4 -0.7 +0.2 +0.1
carbon source butyrate (C) +0.7 -0.9 +0.5 -0.2 -0.0
carbon source L-tyrosine (C) +0.4 +0.8 +0.2 -0.7 -0.5
carbon source L-Phenylalanine (C) +0.4 -0.6 +0.0 +0.2 +0.4
carbon source 2-Deoxy-D-Ribose (C) +0.6 -0.6 -0.1 +0.3 +0.3
plant outgrowth control Plant outgrowth control +0.3 +0.4 -0.3 +0.4 -0.3
phage V1_1 +0.3 +0.5 -0.2 +0.2 -0.3
carbon source pyruvate (C) +0.7 -0.3 -0.1 -0.2 +0.5
carbon source Adenine (C) +0.1 -0.2 +0.6 -0.3 +0.4
phage V2_10 +0.8 +0.2 -0.4 -0.2 +0.4
carbon source D-Gluconic Acid (C) +0.8 -0.6 +0.1 +0.4 +0.0
carbon source L-Phenylalanine (C) +0.5 -0.4 -0.0 +0.3 +0.5
carbon source L-tyrosine (C) -0.2 +0.4 +0.3 -0.1 +0.5
carbon source Gly-Glu (C) +0.1 +0.3 -0.2 +0.5 +0.3
carbon source L-Glutamine (C) +0.4 +0.1 -0.2 +0.2 +0.7
carbon source L-Asparagine (C) +0.6 +0.1 +0.6 -0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +0.9 -1.0 +0.3 +0.2
remove
ABID97_RS26075
plot
remove
ABID97_RS26080
plot
remove
ABID97_RS26085
remove
ABID97_RS26090
plot
remove
ABID97_RS26095
plot