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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABID97_RS26010 and ABID97_RS26015 are separated by 131 nucleotides
ABID97_RS26015 and ABID97_RS26020 are separated by 1 nucleotides
ABID97_RS26020 and ABID97_RS26025 are separated by 11 nucleotides
ABID97_RS26025 and ABID97_RS26030 are separated by 21 nucleotides
ABID97_RS26010: ABID97_RS26010 - ABC transporter substrate-binding protein, at 126,048 to 127,208
_RS26010
ABID97_RS26015: ABID97_RS26015 - branched-chain amino acid ABC transporter permease, at 127,340 to 128,210
_RS26015
ABID97_RS26020: ABID97_RS26020 - branched-chain amino acid ABC transporter ATP-binding protein/permease, at 128,212 to 130,185
_RS26020
ABID97_RS26025: ABID97_RS26025 - ABC transporter ATP-binding protein, at 130,197 to 130,919
_RS26025
ABID97_RS26030: ABID97_RS26030 - DUF1330 domain-containing protein, at 130,941 to 131,267
_RS26030
Group
Condition
ABID97
_RS26010
ABID97
_RS26015
ABID97
_RS26020
ABID97
_RS26025
ABID97
_RS26030
phage
V2_100
-0.1
-0.1
-0.4
N.D.
-1.9
r2a outgrowth control
R2A outgrowth control
-0.8
-0.5
-0.4
N.D.
-0.2
carbon source
L-Histidine (C)
-0.1
-0.3
-1.3
N.D.
-0.1
carbon source
butyrate (C)
-0.2
-0.1
-0.7
N.D.
-0.5
phage
V2_10
-0.3
-0.1
-0.2
N.D.
-0.9
phage
V2_1
+0.2
-0.3
-0.2
N.D.
-0.9
carbon source
D-Serine (C)
+0.1
-0.4
+0.3
N.D.
-1.1
carbon source
D-Ribose (C)
+0.2
-0.7
-1.0
N.D.
+0.5
carbon source
Tween 20 (C)
+0.6
-0.2
-2.0
N.D.
+0.7
carbon source
L-tyrosine (C)
+0.9
-0.2
-0.0
N.D.
-1.5
carbon source
D,L-Malic Acid (C)
+0.4
-0.3
+0.1
N.D.
-0.7
carbon source
D-Glucuronic Acid (C)
+0.2
+0.0
-1.2
N.D.
+0.4
carbon source
L-Lactate (C)
-0.1
-0.3
-0.8
N.D.
+1.0
carbon source
Glycolic Acid (C)
+0.2
+0.1
-0.8
N.D.
+0.4
carbon source
D-Galactose (C)
+0.0
-0.4
-0.4
N.D.
+0.8
carbon source
acetate (C)
+0.4
-0.0
-0.7
N.D.
+0.4
carbon source
D-Arabinose (C)
-0.2
-0.5
+0.1
N.D.
+0.7
carbon source
pyruvate (C)
+0.4
-0.3
-0.3
N.D.
+0.5
carbon source
L-Glutamic (C)
-0.0
+0.3
-0.7
N.D.
+0.8
carbon source
L-Leucine (C)
+0.3
-0.4
-0.2
N.D.
+0.7
carbon source
L-Proline (C)
+0.2
-0.1
-0.5
N.D.
+0.8
carbon source
L-Phenylalanine (C)
+0.4
-0.1
-0.6
N.D.
+0.9
carbon source
a-Ketoglutaric (C)
+0.4
+0.2
-0.4
N.D.
+0.5
carbon source
L-Histidine (C)
-0.1
-0.1
-0.4
N.D.
+1.3
carbon source
Gly-Glu (C)
+0.2
-0.3
+0.1
N.D.
+0.9
carbon source
L-Tryptophan (C)
+0.3
-0.0
-0.3
N.D.
+1.0
carbon source
Glycerol (C)
+0.3
-0.2
-0.3
N.D.
+1.2
carbon source
D,L-Malic Acid (C)
+0.4
-0.1
-0.0
N.D.
+1.0
carbon source
Adenine (C)
+0.2
-0.2
+0.6
N.D.
+0.8
carbon source
D-Glucose (C)
+0.4
+0.1
+0.4
N.D.
+1.0
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