Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25980 and ABID97_RS25985 are separated by 150 nucleotidesABID97_RS25985 and ABID97_RS25990 are separated by 26 nucleotidesABID97_RS25990 and ABID97_RS25995 are separated by 31 nucleotidesABID97_RS25995 and ABID97_RS26000 are separated by 27 nucleotides ABID97_RS25980: ABID97_RS25980 - LysR family transcriptional regulator, at 119,526 to 120,488 _RS25980 ABID97_RS25985: ABID97_RS25985 - CaiB/BaiF CoA-transferase family protein, at 120,639 to 121,880 _RS25985 ABID97_RS25990: ABID97_RS25990 - aldehyde dehydrogenase, at 121,907 to 123,397 _RS25990 ABID97_RS25995: ABID97_RS25995 - SDR family oxidoreductase, at 123,429 to 124,217 _RS25995 ABID97_RS26000: ABID97_RS26000 - quinone oxidoreductase, at 124,245 to 125,228 _RS26000
Group Condition ABID97_RS25980 ABID97_RS25985 ABID97_RS25990 ABID97_RS25995 ABID97_RS26000
carbon source D,L-Malic Acid (C) -0.3 -0.4 -0.9 N.D. +0.0
carbon source L-Histidine (C) +0.1 -1.3 -0.1 N.D. -0.1
carbon source L-Histidine (C) -0.1 -0.4 -0.8 N.D. +0.0
carbon source D-Glucuronic Acid (C) -0.5 -0.3 -0.4 N.D. -0.1
carbon source Glycolic Acid (C) -0.3 -0.3 -0.3 N.D. -0.4
carbon source L-Alanine (C) -0.3 -0.3 -0.7 N.D. +0.0
carbon source D-Gluconic Acid (C) +0.0 -0.6 -0.4 N.D. -0.1
carbon source D-Mannose (C) +0.1 -0.7 -0.2 N.D. -0.2
carbon source L-Arabinose (C) +0.3 -0.5 -0.6 N.D. -0.2
carbon source L-Fucose (C) -0.1 -0.4 -0.8 N.D. +0.3
carbon source D-Serine (C) -0.4 -0.3 -0.4 N.D. +0.2
carbon source Tween 20 (C) +0.0 -0.7 +0.3 N.D. -0.3
carbon source Adenine (C) -0.0 -0.5 -0.5 N.D. +0.3
carbon source Adenine (C) -0.2 -0.2 -0.6 N.D. +0.4
carbon source D-Gluconic Acid (C) +0.0 -0.4 -0.4 N.D. +0.4
carbon source D-Xylose (C) +0.0 +0.6 -0.6 N.D. -0.1
carbon source butyrate (C) +0.1 -0.4 -0.2 N.D. +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.0 +0.3 N.D. -0.6
carbon source propionate (C) -0.2 +0.9 -0.3 N.D. -0.1
plant outgrowth control Plant outgrowth control +0.4 +0.4 +0.1 N.D. -0.4
phage V2_10 -0.0 +0.5 +0.4 N.D. -0.3
r2a outgrowth control R2A outgrowth control +0.2 +0.2 +0.5 N.D. -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.4 +0.3 N.D. -0.1
carbon source a-Ketoglutaric (C) +0.1 +0.8 -0.2 N.D. +0.2
carbon source L-Phenylalanine (C) -0.1 +0.6 +0.3 N.D. +0.2
plant outgrowth control Plant outgrowth control +0.7 -0.1 +0.5 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 -0.0 +0.8 N.D. +0.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 +5.2 -0.1 N.D. -0.2
carbon source L-tyrosine (C) -0.1 +5.4 -0.3 N.D. +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.3 +5.4 +0.1 N.D. -0.1
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