Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25825 and ABID97_RS25830 are separated by 2 nucleotidesABID97_RS25830 and ABID97_RS25835 overlap by 4 nucleotidesABID97_RS25835 and ABID97_RS25840 are separated by 47 nucleotidesABID97_RS25840 and ABID97_RS25845 are separated by 4 nucleotides ABID97_RS25825: ABID97_RS25825 - HHHH-motif protein, at 85,713 to 85,886 _RS25825 ABID97_RS25830: ABID97_RS25830 - Gfo/Idh/MocA family oxidoreductase, at 85,889 to 86,878 _RS25830 ABID97_RS25835: ABID97_RS25835 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 86,875 to 87,993 _RS25835 ABID97_RS25840: ABID97_RS25840 - carbohydrate ABC transporter permease, at 88,041 to 88,931 _RS25840 ABID97_RS25845: ABID97_RS25845 - sugar ABC transporter permease, at 88,936 to 89,898 _RS25845
Group Condition ABID97_RS25825 ABID97_RS25830 ABID97_RS25835 ABID97_RS25840 ABID97_RS25845
carbon source L-Alanine (C) N.D. +0.3 -0.4 -0.1 -2.6
carbon source L-Phenylalanine (C) N.D. -1.1 +0.1 -0.3 -0.3
carbon source D-Serine (C) N.D. -0.7 +0.2 -0.3 -0.8
carbon source propionate (C) N.D. -0.8 -0.4 +0.2 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.4 +0.0 -0.4 -1.4
carbon source L-Arabinose (C) N.D. -0.3 -0.1 -0.1 -0.8
carbon source D-Ribose (C) N.D. -0.1 -0.0 -0.5 -0.6
carbon source pyruvate (C) N.D. +0.3 -0.4 -0.2 -1.0
carbon source propionate (C) N.D. +0.5 +0.0 -0.5 -1.2
carbon source Ethanol (C) N.D. -0.6 -0.3 +0.1 -0.4
carbon source D,L-Lactate (C) N.D. +0.4 +0.0 -0.2 -1.3
plant outgrowth control Plant outgrowth control N.D. +0.4 -0.1 -0.0 -1.3
carbon source D-Fructose (C) N.D. +0.1 -0.2 +0.2 -1.0
carbon source Tween 20 (C) N.D. +0.3 -0.0 -0.4 -0.7
carbon source L-tyrosine (C) N.D. -0.8 -0.5 -0.5 +1.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.4 +0.3 -0.3 -0.8
carbon source D,L-Lactate (C) N.D. +0.3 +0.2 -0.2 -0.6
phage V2_100 N.D. -0.1 -0.7 +0.1 +0.4
carbon source D-Sorbitol (C) N.D. +0.6 +0.0 -0.4 -0.4
carbon source D-Gluconic Acid (C) N.D. +0.4 -0.5 -0.2 +0.2
carbon source Gly-Glu (C) N.D. +0.5 +0.3 -0.2 -0.4
carbon source D-Arabinose (C) N.D. +0.8 +0.1 +0.1 -0.7
carbon source butyrate (C) N.D. -0.4 -0.3 +0.0 +1.1
carbon source D-Gluconic Acid (C) N.D. +0.2 -0.3 -0.1 +0.7
carbon source L-Fucose (C) N.D. +0.2 -0.1 -0.4 +0.8
carbon source D,L-Malic Acid (C) N.D. +0.3 -0.2 -0.5 +1.0
carbon source L-Histidine (C) N.D. +0.3 +0.3 -0.2 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.9 +1.3 +0.2 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.9 -0.1 +1.0 +0.5
carbon source L-Alanine (C) N.D. +0.0 +0.4 +0.3 +1.6
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