Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25715 and ABID97_RS25720 are separated by 20 nucleotidesABID97_RS25720 and ABID97_RS25725 are separated by 55 nucleotidesABID97_RS25725 and ABID97_RS25730 are separated by 5 nucleotidesABID97_RS25730 and ABID97_RS25735 overlap by 4 nucleotides ABID97_RS25715: ABID97_RS25715 - cupin domain-containing protein, at 62,682 to 63,401 _RS25715 ABID97_RS25720: ABID97_RS25720 - FAD-binding oxidoreductase, at 63,422 to 64,747 _RS25720 ABID97_RS25725: ABID97_RS25725 - peptide ABC transporter substrate-binding protein, at 64,803 to 66,476 _RS25725 ABID97_RS25730: ABID97_RS25730 - ABC transporter permease, at 66,482 to 67,438 _RS25730 ABID97_RS25735: ABID97_RS25735 - ABC transporter permease, at 67,435 to 68,322 _RS25735
Group Condition ABID97_RS25715 ABID97_RS25720 ABID97_RS25725 ABID97_RS25730 ABID97_RS25735
carbon source D,L-Malic Acid (C) N.D. -0.4 -0.4 -1.1 -0.5
carbon source D-Sorbitol (C) N.D. -0.1 -0.3 -1.0 -1.0
carbon source Glucuronamide (C) N.D. +0.3 -0.5 -0.7 -0.5
carbon source L-Histidine (C) N.D. -0.0 -0.2 -0.6 -0.5
carbon source L-Alanine (C) N.D. -0.2 -0.6 -0.5 +0.0
carbon source Glycolic Acid (C) N.D. +0.3 -0.1 -0.6 -0.5
carbon source pyruvate (C) N.D. -0.4 -0.5 -0.2 +0.2
carbon source Glucuronamide (C) N.D. +0.2 +0.2 -1.0 -0.1
carbon source Fumarate (C) N.D. -0.0 +0.0 -0.9 +0.2
carbon source L-Glutamine (C) N.D. +0.7 -0.1 -0.1 -0.9
carbon source L-Tryptophan (C) N.D. +0.6 -0.5 -0.3 -0.3
carbon source Tween 20 (C) N.D. +0.1 +0.1 +0.1 -0.8
carbon source Ethanol (C) N.D. +0.6 -0.2 -1.2 +0.4
phage V1_10 N.D. +0.3 +0.0 -0.6 -0.2
carbon source D-Glucuronic Acid (C) N.D. +0.5 -0.5 -0.4 +0.2
carbon source D-Mannose (C) N.D. +0.3 -0.2 -0.4 +0.3
carbon source L-tyrosine (C) N.D. -0.3 +0.4 -0.4 +0.4
carbon source L-Fucose (C) N.D. -0.3 -0.3 +0.5 +0.1
phage V2_100 N.D. +0.1 -0.2 +0.7 -0.5
phage V2_10 N.D. +0.8 -0.1 -0.7 +0.3
carbon source acetate (C) N.D. +0.4 +0.3 -0.6 +0.2
carbon source D-Arabinose (C) N.D. +0.8 -0.1 -0.4 +0.1
carbon source D-Galactose (C) N.D. +0.4 -0.2 +0.5 +0.2
carbon source D-Xylose (C) N.D. +0.7 +0.1 +0.4 +0.0
carbon source D-Xylose (C) N.D. +0.5 -0.0 +0.4 +0.3
carbon source L-Threonine (C) N.D. +0.7 -0.0 +0.5 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.4 -0.0 +0.2 +1.0
plant outgrowth control Plant outgrowth control N.D. +0.1 +0.1 +1.1 +0.3
carbon source propionate (C) N.D. +0.3 +0.8 +1.1 -0.7
carbon source propionate (C) N.D. +2.0 +1.1 -0.7 +0.1
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ABID97_RS25715
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