Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25690 and ABID97_RS25695 are separated by 22 nucleotidesABID97_RS25695 and ABID97_RS25700 are separated by 112 nucleotidesABID97_RS25700 and ABID97_RS25705 overlap by 20 nucleotidesABID97_RS25705 and ABID97_RS25710 are separated by 227 nucleotides ABID97_RS25690: ABID97_RS25690 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 57,089 to 58,051 _RS25690 ABID97_RS25695: ABID97_RS25695 - cupin domain-containing protein, at 58,074 to 59,054 _RS25695 ABID97_RS25700: ABID97_RS25700 - LysR substrate-binding domain-containing protein, at 59,167 to 60,084 _RS25700 ABID97_RS25705: ABID97_RS25705 - GNAT family N-acetyltransferase, at 60,065 to 60,949 _RS25705 ABID97_RS25710: ABID97_RS25710 - aldehyde dehydrogenase family protein, at 61,177 to 62,685 _RS25710
Group Condition ABID97_RS25690 ABID97_RS25695 ABID97_RS25700 ABID97_RS25705 ABID97_RS25710
carbon source D-Galactose (C) -2.7 -0.2 -0.2 -0.7 N.D.
carbon source L-tyrosine (C) -3.3 +0.3 -0.2 +0.0 N.D.
carbon source Formate (C) -2.0 -0.7 -0.3 -0.1 N.D.
carbon source L-Alanine (C) -2.1 -0.9 +0.7 -0.5 N.D.
carbon source acetate (C) -2.2 -0.2 -0.1 -0.3 N.D.
carbon source L-Glutamic (C) -1.1 -0.5 -0.7 -0.3 N.D.
carbon source Fumarate (C) -1.7 -0.5 -0.2 -0.1 N.D.
carbon source D,L-Malic Acid (C) -2.7 -0.0 +0.4 +0.2 N.D.
carbon source Glycerol (C) -1.7 -0.2 -0.2 +0.0 N.D.
carbon source D-Serine (C) -1.2 -0.1 -0.1 -0.5 N.D.
carbon source propionate (C) -0.8 -0.5 -0.3 -0.3 N.D.
carbon source L-Glutamine (C) -1.0 -0.1 -0.4 -0.2 N.D.
carbon source L-Fucose (C) -1.2 +0.3 -0.2 -0.7 N.D.
phage V2_100 -1.4 -0.0 -0.1 -0.2 N.D.
carbon source Tween 20 (C) -1.1 +0.2 -0.4 -0.3 N.D.
carbon source Fumarate (C) -0.8 -0.7 +0.1 -0.2 N.D.
carbon source a-Ketoglutaric (C) -0.9 +0.3 -0.1 -0.9 N.D.
carbon source 2-Deoxy-D-Ribose (C) -1.9 +0.2 +0.1 +0.1 N.D.
carbon source Ethanol (C) +0.4 -0.6 -0.5 -0.7 N.D.
carbon source Glucuronamide (C) -0.7 -1.0 +0.0 +0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.2 -0.2 -1.1 N.D.
phage V1_1 -0.9 +0.1 +0.4 -0.3 N.D.
carbon source L-Histidine (C) +0.5 -0.4 -0.6 -0.1 N.D.
carbon source L-Phenylalanine (C) +0.6 -0.3 -0.3 -0.5 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 +1.0 -0.5 +0.3 N.D.
carbon source L-Arabinose (C) -0.3 -0.7 +0.8 +0.0 N.D.
carbon source D-Glucose (C) +0.4 +0.5 -0.8 +0.0 N.D.
carbon source D-Galactose (C) -0.6 +0.6 +0.6 -0.3 N.D.
carbon source propionate (C) +0.1 +0.9 +0.5 -0.5 N.D.
r2a outgrowth control R2A outgrowth control +1.0 +0.2 -0.2 +0.2 N.D.
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