Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25555 and ABID97_RS25560 are separated by 38 nucleotidesABID97_RS25560 and ABID97_RS25565 are separated by 43 nucleotidesABID97_RS25565 and ABID97_RS25570 overlap by 12 nucleotidesABID97_RS25570 and ABID97_RS25575 are separated by 110 nucleotides ABID97_RS25555: ABID97_RS25555 - alpha/beta hydrolase, at 31,215 to 32,036 _RS25555 ABID97_RS25560: ABID97_RS25560 - alpha/beta hydrolase, at 32,075 to 33,010 _RS25560 ABID97_RS25565: ABID97_RS25565 - NADP-dependent oxidoreductase, at 33,054 to 33,998 _RS25565 ABID97_RS25570: ABID97_RS25570 - alkene reductase, at 33,987 to 35,048 _RS25570 ABID97_RS25575: ABID97_RS25575 - LysR family transcriptional regulator, at 35,159 to 36,034 _RS25575
Group Condition ABID97_RS25555 ABID97_RS25560 ABID97_RS25565 ABID97_RS25570 ABID97_RS25575
carbon source D,L-Malic Acid (C) N.D. +0.5 -2.0 -1.8 -0.0
carbon source propionate (C) N.D. -0.8 +0.0 -0.4 -0.0
phage V2_100 N.D. +0.1 -0.6 -0.3 +0.0
plant outgrowth control Plant outgrowth control N.D. -0.3 -0.1 -0.4 +0.0
phage V2_1 N.D. +0.1 -0.3 -0.6 +0.1
control NP N.D. +0.1 -0.4 -0.3 +0.1
carbon source D-Glucuronic Acid (C) N.D. +0.2 -0.6 -0.1 -0.1
carbon source D-Serine (C) N.D. -0.3 +0.3 -0.2 -0.2
carbon source L-tyrosine (C) N.D. -0.8 +0.2 +0.2 +0.0
carbon source D-Sorbitol (C) N.D. -0.5 +0.2 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 -0.1 +0.4 -0.0
carbon source L-tyrosine (C) N.D. +0.4 -0.0 -0.3 -0.3
carbon source Glycolic Acid (C) N.D. -0.5 +0.4 +0.2 -0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 +0.2 +0.5 -0.0
phage V1_10 N.D. -0.1 +0.3 -0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.2 -0.4 +0.2 +0.1
carbon source D-Xylose (C) N.D. +0.4 +0.4 -0.4 -0.2
carbon source D,L-Malic Acid (C) N.D. +0.3 +0.5 -0.1 -0.3
carbon source Adenine (C) N.D. -0.2 +0.4 +0.0 +0.2
carbon source D-Arabinose (C) N.D. -0.3 +0.6 +0.2 +0.0
carbon source Tween 20 (C) N.D. +0.3 +0.3 +0.1 -0.2
carbon source Adenine (C) N.D. +0.4 +0.4 -0.2 +0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.4 +0.5 -0.2 +0.0
carbon source L-Arabinose (C) N.D. -0.2 +0.8 +0.1 -0.0
carbon source D-Gluconic Acid (C) N.D. +0.4 +0.3 -0.0 -0.1
carbon source L-Leucine (C) N.D. +0.6 +0.1 -0.1 +0.0
carbon source Glycerol (C) N.D. +0.0 +0.4 +0.2 +0.2
carbon source L-Glutamine (C) N.D. +0.4 +0.3 +0.3 -0.0
carbon source Gly-Glu (C) N.D. +0.7 +0.2 +0.0 -0.0
carbon source D-Fructose (C) N.D. +0.3 +0.5 +0.3 +0.0
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ABID97_RS25555
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ABID97_RS25560
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