Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25355 and ABID97_RS25360 are separated by 157 nucleotidesABID97_RS25360 and ABID97_RS25365 are separated by 29 nucleotidesABID97_RS25365 and ABID97_RS25370 are separated by 17 nucleotidesABID97_RS25370 and ABID97_RS25375 are separated by 105 nucleotides ABID97_RS25355: ABID97_RS25355 - Lrp/AsnC family transcriptional regulator, at 5,253,874 to 5,254,347 _RS25355 ABID97_RS25360: ABID97_RS25360 - 4-hydroxyphenylpyruvate dioxygenase, at 5,254,505 to 5,255,632 _RS25360 ABID97_RS25365: ABID97_RS25365 - transporter substrate-binding domain-containing protein, at 5,255,662 to 5,256,459 _RS25365 ABID97_RS25370: ABID97_RS25370 - phenylalanine 4-monooxygenase, at 5,256,477 to 5,257,361 _RS25370 ABID97_RS25375: ABID97_RS25375 - AMP-binding protein, at 5,257,467 to 5,259,158 _RS25375
Group Condition ABID97_RS25355 ABID97_RS25360 ABID97_RS25365 ABID97_RS25370 ABID97_RS25375
carbon source L-Phenylalanine (C) -7.2 -6.5 -2.7 -7.0 +0.0
carbon source L-Phenylalanine (C) -7.0 -6.2 -2.8 -6.4 -0.0
phage V2_1 -0.1 -0.1 -0.3 -0.1 -0.1
carbon source Glycerol (C) -0.0 -0.3 -0.2 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.2 +0.2 -0.1 -0.8
carbon source Tween 20 (C) +0.1 -0.1 -0.2 -0.2 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.1 +0.2 -0.2 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 -0.0 -0.2 -0.3
carbon source D-Sorbitol (C) +0.0 -0.2 -0.1 -0.1 -0.1
carbon source D-Fructose (C) +0.1 -0.2 -0.0 -0.2 -0.1
carbon source Glycolic Acid (C) +0.0 -0.2 -0.2 -0.1 +0.1
carbon source L-Histidine (C) +0.1 +0.1 +0.1 -0.7 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.1 -0.1 -0.1 -0.1
carbon source butyrate (C) -0.2 -0.2 +0.1 +0.0 +0.1
r2a outgrowth control R2A outgrowth control +0.0 -0.2 +0.2 -0.1 -0.0
r2a outgrowth control R2A outgrowth control +0.1 -0.1 +0.2 -0.3 +0.0
carbon source Adenine (C) +0.1 -0.3 +0.1 +0.0 +0.1
carbon source L-Alanine (C) +0.1 -0.2 +0.1 -0.1 +0.1
carbon source propionate (C) +0.4 -0.0 -0.2 -0.0 +0.1
phage V2_100 -0.0 -0.2 +0.3 +0.1 +0.1
carbon source L-Histidine (C) +0.4 -0.0 +0.1 -0.5 +0.2
carbon source Glucuronamide (C) +0.1 -0.2 +0.3 -0.1 +0.1
carbon source Glucuronamide (C) +0.1 -0.2 +0.3 -0.1 +0.1
carbon source butyrate (C) +0.0 -0.1 +0.2 +0.2 -0.0
carbon source L-Arabinose (C) +0.2 -0.1 +0.3 -0.1 -0.0
carbon source D-Glucuronic Acid (C) +0.3 -0.0 -0.1 +0.1 +0.1
carbon source L-Glutamine (C) +0.1 -0.1 +0.2 -0.0 +0.1
r2a outgrowth control R2A outgrowth control +0.1 +0.0 +0.3 -0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.1 +0.3 -0.0 -0.0
carbon source propionate (C) +0.2 +0.0 +0.2 +0.1 +0.2
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