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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. OAS795
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500 nt
ABID97_RS25290 and ABID97_RS25295 overlap by 4 nucleotides
ABID97_RS25295 and ABID97_RS25300 are separated by 112 nucleotides
ABID97_RS25300 and ABID97_RS25305 are separated by 111 nucleotides
ABID97_RS25305 and ABID97_RS25310 overlap by 4 nucleotides
ABID97_RS25290: ABID97_RS25290 - TetR family transcriptional regulator C-terminal domain-containing protein, at 5,240,556 to 5,241,233
_RS25290
ABID97_RS25295: ABID97_RS25295 - LysR family transcriptional regulator, at 5,241,230 to 5,242,174
_RS25295
ABID97_RS25300: ABID97_RS25300 - MFS transporter, at 5,242,287 to 5,243,513
_RS25300
ABID97_RS25305: ABID97_RS25305 - NAD(P)H-dependent oxidoreductase, at 5,243,625 to 5,244,212
_RS25305
ABID97_RS25310: ABID97_RS25310 - amidohydrolase family protein, at 5,244,209 to 5,245,486
_RS25310
Group
Condition
ABID97
_RS25290
ABID97
_RS25295
ABID97
_RS25300
ABID97
_RS25305
ABID97
_RS25310
carbon source
L-Phenylalanine (C)
-0.6
-0.7
-1.0
-1.3
N.D.
carbon source
L-Phenylalanine (C)
-0.7
-0.9
-0.8
-1.3
N.D.
carbon source
Gly-Glu (C)
-0.5
-0.6
-0.5
-0.7
N.D.
carbon source
D-Glucuronic Acid (C)
-0.3
-0.4
-0.5
-1.1
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.4
-0.4
-0.7
-0.6
N.D.
carbon source
Gly-Glu (C)
-0.2
-0.3
-0.8
-0.7
N.D.
carbon source
D-Glucose (C)
-0.3
-0.3
-0.5
-0.7
N.D.
carbon source
acetate (C)
-0.4
-0.3
-0.4
-0.6
N.D.
carbon source
L-Proline (C)
-0.2
-0.4
-0.4
-0.4
N.D.
carbon source
D-Xylose (C)
-0.2
-0.1
-0.4
-0.6
N.D.
carbon source
D-Gluconic Acid (C)
-0.2
-0.2
-0.5
-0.5
N.D.
carbon source
L-Histidine (C)
-0.2
-0.1
-0.3
-0.7
N.D.
carbon source
D-Xylose (C)
-0.2
-0.4
-0.3
-0.4
N.D.
carbon source
D-Gluconic Acid (C)
-0.2
-0.2
-0.3
-0.4
N.D.
carbon source
D-Lactate (C)
+0.0
-0.2
-0.5
-0.5
N.D.
carbon source
L-Proline (C)
-0.3
-0.2
-0.3
-0.4
N.D.
carbon source
Glycolic Acid (C)
-0.0
-0.2
-0.4
-0.5
N.D.
carbon source
D-Fructose (C)
-0.3
-0.2
-0.2
-0.3
N.D.
carbon source
a-Ketoglutaric (C)
-0.2
-0.4
-0.2
-0.1
N.D.
carbon source
D-Fructose (C)
-0.1
-0.2
-0.1
-0.5
N.D.
carbon source
D-Arabinose (C)
-0.1
-0.3
-0.2
-0.3
N.D.
carbon source
L-Fucose (C)
-0.1
-0.2
-0.2
-0.3
N.D.
carbon source
L-Threonine (C)
-0.1
-0.3
-0.1
-0.3
N.D.
carbon source
Glycerol (C)
-0.1
-0.1
-0.2
-0.4
N.D.
carbon source
L-Threonine (C)
+0.0
-0.2
+0.1
-0.6
N.D.
carbon source
propionate (C)
-0.5
+0.3
+0.1
-0.4
N.D.
carbon source
L-Malic (C)
+0.2
+0.3
-0.2
-0.1
N.D.
phage
V2_100
+0.1
-0.0
+0.6
+0.3
N.D.
carbon source
butyrate (C)
+0.6
+0.6
+0.8
+1.9
N.D.
carbon source
butyrate (C)
+0.7
+0.5
+1.2
+1.9
N.D.
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