Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS25095 and ABID97_RS25100 are separated by 31 nucleotidesABID97_RS25100 and ABID97_RS25105 are separated by 116 nucleotidesABID97_RS25105 and ABID97_RS25110 are separated by 110 nucleotidesABID97_RS25110 and ABID97_RS25115 are separated by 13 nucleotides ABID97_RS25095: ABID97_RS25095 - YbaK/EbsC family protein, at 5,198,601 to 5,199,089 _RS25095 ABID97_RS25100: ABID97_RS25100 - hydroxymethylglutaryl-CoA lyase, at 5,199,121 to 5,200,041 _RS25100 ABID97_RS25105: ABID97_RS25105 - glyoxylate/hydroxypyruvate reductase A, at 5,200,158 to 5,201,078 _RS25105 ABID97_RS25110: ABID97_RS25110 - EthD family reductase, at 5,201,189 to 5,201,503 _RS25110 ABID97_RS25115: ABID97_RS25115 - acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha, at 5,201,517 to 5,203,517 _RS25115
Group Condition ABID97_RS25095 ABID97_RS25100 ABID97_RS25105 ABID97_RS25110 ABID97_RS25115
carbon source L-Leucine (C) N.D. -8.2 +0.0 -0.1 -7.5
carbon source L-Leucine (C) N.D. -5.7 +0.2 -0.0 -6.8
carbon source casaminos (C) N.D. -2.1 -0.1 +0.0 -1.6
carbon source casaminos (C) N.D. -1.9 -0.1 -0.1 -1.3
carbon source pyruvate (C) N.D. -2.5 -0.0 -0.1 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.3 -0.0 -0.1 -1.2
carbon source pyruvate (C) N.D. -2.1 +0.3 +0.1 -0.7
carbon source Tween 20 (C) N.D. -1.2 -0.2 -0.1 -0.8
carbon source Glycolic Acid (C) N.D. -1.1 -0.5 -0.4 -0.5
r2a outgrowth control R2A outgrowth control N.D. -1.3 -0.0 +0.0 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -1.3 +0.1 +0.0 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.8 -0.0 -0.1 -1.2
r2a outgrowth control R2A outgrowth control N.D. -1.4 -0.0 +0.1 -0.8
carbon source L-Alanine (C) N.D. -0.9 +0.1 -0.3 -0.7
carbon source L-Fucose (C) N.D. -1.0 -0.3 +0.1 -0.5
carbon source D-Mannose (C) N.D. -1.4 +0.0 +0.0 -0.5
carbon source succinate (C) N.D. -0.8 -0.1 -0.2 -0.6
r2a outgrowth control R2A outgrowth control N.D. -1.3 +0.2 -0.0 -0.6
carbon source D-Arabinose (C) N.D. -1.1 +0.0 -0.2 -0.6
carbon source L-Malic (C) N.D. -1.1 +0.2 -0.1 -0.7
plant outgrowth control Plant outgrowth control N.D. -1.0 +0.0 -0.1 -0.7
carbon source Adenine (C) N.D. -1.1 +0.4 -0.1 -0.9
carbon source L-Fucose (C) N.D. -0.7 +0.1 -0.1 -1.0
carbon source Glycerol (C) N.D. -0.9 -0.2 +0.1 -0.6
carbon source D-Ribose (C) N.D. -1.1 +0.1 -0.0 -0.6
carbon source D-Arabinose (C) N.D. -1.1 +0.3 -0.0 -0.7
carbon source Fumarate (C) N.D. -1.0 +0.4 -0.1 -0.7
carbon source L-Asparagine (C) N.D. -1.0 +0.2 -0.1 -0.5
plant outgrowth control Plant outgrowth control N.D. -0.8 +0.4 +0.1 -1.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. +1.6 +0.2 +0.1 +1.3
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