Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS25080 and ABID97_RS25085 are separated by 163 nucleotidesABID97_RS25085 and ABID97_RS25090 overlap by 4 nucleotidesABID97_RS25090 and ABID97_RS25095 overlap by 4 nucleotidesABID97_RS25095 and ABID97_RS25100 are separated by 31 nucleotides ABID97_RS25080: ABID97_RS25080 - MFS transporter, at 5,195,833 to 5,197,527 _RS25080 ABID97_RS25085: ABID97_RS25085 - 2-hydroxychromene-2-carboxylate isomerase, at 5,197,691 to 5,198,338 _RS25085 ABID97_RS25090: ABID97_RS25090 - DUF1289 domain-containing protein, at 5,198,335 to 5,198,604 _RS25090 ABID97_RS25095: ABID97_RS25095 - YbaK/EbsC family protein, at 5,198,601 to 5,199,089 _RS25095 ABID97_RS25100: ABID97_RS25100 - hydroxymethylglutaryl-CoA lyase, at 5,199,121 to 5,200,041 _RS25100
Group Condition ABID97_RS25080 ABID97_RS25085 ABID97_RS25090 ABID97_RS25095 ABID97_RS25100
carbon source L-Leucine (C) -0.5 -4.5 -0.2 N.D. -8.2
carbon source L-Leucine (C) -0.4 -4.5 +0.3 N.D. -5.7
carbon source Glycolic Acid (C) -4.5 -4.3 -0.7 N.D. -0.7
carbon source L-Lactate (C) -4.8 -2.1 -1.3 N.D. -0.7
carbon source Glycolic Acid (C) -4.8 -1.8 -0.8 N.D. -1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -4.7 -1.5 N.D. -1.3
carbon source L-Lactate (C) -4.8 -1.6 -0.5 N.D. -0.7
carbon source D,L-Lactate (C) -5.1 -0.5 -0.3 N.D. -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -4.7 -0.6 N.D. -0.8
carbon source L-Tryptophan (C) -1.5 -4.3 +0.4 N.D. -0.9
carbon source Tween 20 (C) -0.5 -3.5 -0.8 N.D. -1.2
carbon source D-Lactate (C) -4.4 +0.2 -0.8 N.D. -1.1
carbon source D-Xylose (C) -0.5 -4.5 -0.1 N.D. -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -4.7 +0.4 N.D. -1.3
carbon source 2-Deoxy-D-Ribose (C) -0.9 -4.3 +0.1 N.D. -0.8
carbon source 2-Deoxy-D-Ribose (C) -1.1 -4.1 +0.3 N.D. -0.9
carbon source L-Threonine (C) -0.5 -3.8 -0.3 N.D. -1.0
carbon source D,L-Lactate (C) -4.7 +0.0 -0.2 N.D. -0.8
carbon source D-Glucose (C) -0.8 -4.2 +0.3 N.D. -1.0
carbon source L-Threonine (C) -0.8 -3.4 -0.7 N.D. -0.7
carbon source L-Tryptophan (C) -1.4 -2.7 -0.6 N.D. -0.7
carbon source L-Alanine (C) -2.0 -1.8 -0.6 N.D. -0.9
carbon source D-Glucose (C) -0.7 -4.0 +0.1 N.D. -0.6
carbon source D-Xylose (C) -0.6 -3.3 -0.0 N.D. -1.1
carbon source D-Mannose (C) -0.2 -3.3 -0.1 N.D. -1.4
carbon source D-Gluconic Acid (C) +0.2 -3.5 -0.6 N.D. -0.8
carbon source L-Proline (C) -0.3 -3.7 +0.6 N.D. -0.9
carbon source acetate (C) +0.3 -4.1 +0.4 N.D. -0.9
carbon source D-Arabinose (C) -0.2 -3.2 +0.4 N.D. -1.1
carbon source acetate (C) +0.3 -3.3 +0.2 N.D. -1.0
remove
ABID97_RS25080
plot		 remove
ABID97_RS25085
plot		 remove
ABID97_RS25090		 remove
ABID97_RS25095
plot		 remove
ABID97_RS25100
plot