Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS24840 and ABID97_RS24845 are separated by 114 nucleotidesABID97_RS24845 and ABID97_RS24850 overlap by 4 nucleotidesABID97_RS24850 and ABID97_RS24855 are separated by 7 nucleotidesABID97_RS24855 and ABID97_RS24860 are separated by 137 nucleotides ABID97_RS24840: ABID97_RS24840 - PLP-dependent aminotransferase family protein, at 5,147,477 to 5,148,937 _RS24840 ABID97_RS24845: ABID97_RS24845 - DUF2970 domain-containing protein, at 5,149,052 to 5,149,228 _RS24845 ABID97_RS24850: ABID97_RS24850 - cytochrome c4, at 5,149,225 to 5,149,929 _RS24850 ABID97_RS24855: ABID97_RS24855 - c-type cytochrome, at 5,149,937 to 5,151,223 _RS24855 ABID97_RS24860: ABID97_RS24860 - hypothetical protein, at 5,151,361 to 5,151,609 _RS24860
Group Condition ABID97_RS24840 ABID97_RS24845 ABID97_RS24850 ABID97_RS24855 ABID97_RS24860
carbon source D-Xylose (C) +0.0 N.D. -0.2 -0.4 -0.4
r2a outgrowth control R2A outgrowth control -0.1 N.D. -0.3 -0.3 -0.3
r2a outgrowth control R2A outgrowth control -0.1 N.D. -0.3 -0.3 -0.3
carbon source casaminos (C) +0.0 N.D. -0.3 -0.3 -0.3
carbon source D,L-Malic Acid (C) -0.1 N.D. -0.2 -0.4 -0.2
carbon source a-Ketoglutaric (C) -0.1 N.D. -0.3 -0.3 -0.1
carbon source L-Glutamic (C) -0.0 N.D. -0.2 -0.1 -0.4
carbon source L-Fucose (C) -0.1 N.D. -0.4 -0.3 -0.0
carbon source L-tyrosine (C) -0.1 N.D. +0.1 -0.3 -0.4
carbon source a-Ketoglutaric (C) -0.1 N.D. -0.0 -0.3 -0.3
carbon source D-Mannose (C) -0.1 N.D. -0.1 -0.4 -0.2
carbon source D,L-Lactate (C) -0.1 N.D. -0.1 -0.2 -0.3
carbon source L-Malic (C) +0.1 N.D. -0.1 -0.3 -0.4
carbon source D-Glucose (C) -0.1 N.D. -0.2 -0.3 -0.1
carbon source succinate (C) +0.0 N.D. -0.2 -0.4 -0.1
carbon source butyrate (C) -0.0 N.D. -0.5 -0.2 +0.1
carbon source L-Tryptophan (C) +0.1 N.D. -0.2 -0.2 -0.2
carbon source L-Asparagine (C) +0.0 N.D. -0.4 -0.3 +0.0
carbon source D-Ribose (C) +0.2 N.D. -0.2 -0.3 -0.2
carbon source L-tyrosine (C) +0.1 N.D. -0.1 -0.2 -0.4
carbon source pyruvate (C) -0.0 N.D. -0.3 -0.4 +0.1
carbon source D-Gluconic Acid (C) +0.1 N.D. -0.2 -0.3 -0.1
carbon source D-Galactose (C) -0.0 N.D. -0.2 -0.4 +0.1
carbon source propionate (C) +0.1 N.D. -0.3 -0.2 -0.1
carbon source acetate (C) +0.0 N.D. -0.5 -0.2 +0.2
carbon source Ethanol (C) -0.0 N.D. -0.2 -0.3 +0.2
carbon source Glycerol (C) +0.0 N.D. -0.2 -0.4 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 N.D. -0.3 -0.2 +0.1
carbon source L-Asparagine (C) -0.0 N.D. -0.1 -0.3 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.1 N.D. +0.1 +0.3 +0.3
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