Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS24645 and ABID97_RS24650 are separated by 575 nucleotidesABID97_RS24650 and ABID97_RS24655 are separated by 23 nucleotidesABID97_RS24655 and ABID97_RS24660 overlap by 4 nucleotidesABID97_RS24660 and ABID97_RS24665 overlap by 1 nucleotides ABID97_RS24645: ABID97_RS24645 - autotransporter outer membrane beta-barrel domain-containing protein, at 5,101,113 to 5,106,347 _RS24645 ABID97_RS24650: ABID97_RS24650 - lysophospholipid acyltransferase family protein, at 5,106,923 to 5,107,669 _RS24650 ABID97_RS24655: ABID97_RS24655 - dihydroorotase, at 5,107,693 to 5,108,979 _RS24655 ABID97_RS24660: ABID97_RS24660 - aspartate carbamoyltransferase catalytic subunit, at 5,108,976 to 5,109,938 _RS24660 ABID97_RS24665: ABID97_RS24665 - bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR, at 5,109,938 to 5,110,435 _RS24665
Group Condition ABID97_RS24645 ABID97_RS24650 ABID97_RS24655 ABID97_RS24660 ABID97_RS24665
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.6 -0.5 -0.5 -0.7
carbon source D-Fructose (C) +0.1 -0.1 -0.7 -0.5 -0.5
carbon source D,L-Malic Acid (C) +0.2 -0.4 -0.8 -0.0 -0.6
carbon source L-Phenylalanine (C) +0.0 -0.5 -0.3 -0.1 -0.7
carbon source L-tyrosine (C) -0.0 -0.6 -0.7 +0.1 -0.0
carbon source D-Fructose (C) +0.0 -0.4 -0.2 -0.3 -0.4
carbon source Adenine (C) +0.1 -0.1 -0.3 -0.2 -0.6
carbon source D-Serine (C) +0.0 -0.2 -0.2 -0.1 -0.5
carbon source L-Glutamic (C) +0.1 -0.3 +0.0 -0.1 -0.7
carbon source Tween 20 (C) +0.0 -0.3 +0.1 -0.2 -0.7
carbon source D-Lactate (C) -0.0 -0.3 +0.2 -0.2 -0.5
carbon source butyrate (C) +0.1 -0.4 +0.1 -0.2 -0.3
carbon source D-Glucose (C) -0.0 -0.8 +0.3 +0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -0.4 +0.3 +0.0 -0.5
r2a outgrowth control R2A outgrowth control -0.0 -0.1 +0.3 -0.1 -0.7
carbon source Fumarate (C) -0.1 -0.2 -0.3 -0.2 +0.3
carbon source D-Sorbitol (C) +0.1 -0.2 +0.2 +0.1 -0.6
carbon source butyrate (C) -0.1 -0.3 +0.3 +0.0 -0.4
carbon source L-Fucose (C) -0.0 -0.2 +0.4 -0.1 -0.4
carbon source L-Histidine (C) +0.2 -0.6 +0.0 +0.1 +0.2
carbon source Glycolic Acid (C) +0.1 -0.2 +0.4 +0.0 -0.5
carbon source D-Glucuronic Acid (C) +0.1 -0.2 +0.3 +0.2 -0.3
carbon source Glycerol (C) +0.1 +0.1 +0.2 +0.3 -0.5
carbon source L-Phenylalanine (C) +0.2 -0.4 +0.3 +0.0 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.1 +0.4 -0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +0.1 +0.2 -0.1 +0.7
carbon source a-Ketoglutaric (C) +0.2 -0.3 +0.5 +0.1 +0.4
carbon source D,L-Lactate (C) +0.1 -0.0 +0.1 -0.0 +0.9
carbon source L-Histidine (C) +0.0 -0.3 +0.5 +0.2 +0.7
carbon source L-Leucine (C) +0.1 +0.2 +0.3 +0.1 +0.7
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