Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS24460 and ABID97_RS24465 are separated by 41 nucleotidesABID97_RS24465 and ABID97_RS24470 are separated by 40 nucleotidesABID97_RS24470 and ABID97_RS24475 are separated by 378 nucleotidesABID97_RS24475 and ABID97_RS24480 are separated by 6 nucleotides ABID97_RS24460: ABID97_RS24460 - 2-dehydropantoate 2-reductase, at 5,063,632 to 5,064,645 _RS24460 ABID97_RS24465: ABID97_RS24465 - fumarylacetoacetate hydrolase family protein, at 5,064,687 to 5,065,463 _RS24465 ABID97_RS24470: ABID97_RS24470 - succinate--CoA ligase subunit alpha, at 5,065,504 to 5,066,403 _RS24470 ABID97_RS24475: ABID97_RS24475 - ADP-forming succinate--CoA ligase subunit beta, at 5,066,782 to 5,067,951 _RS24475 ABID97_RS24480: ABID97_RS24480 - hypothetical protein, at 5,067,958 to 5,068,287 _RS24480
Group Condition ABID97_RS24460 ABID97_RS24465 ABID97_RS24470 ABID97_RS24475 ABID97_RS24480
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -1.4 -1.5 -2.9 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -1.4 -0.7 -2.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.7 -0.6 -1.7 +0.0
control NP -0.5 -1.0 +0.1 -1.4 +0.1
phage V1_10 -0.5 -0.7 +0.1 -0.9 -0.3
phage V2_1 -0.5 -0.5 -0.1 -1.1 -0.0
phage V1_1 -0.3 -0.5 -0.2 -1.2 +0.1
phage V1_10 -0.9 -0.5 +0.0 -0.8 +0.2
plant outgrowth control Plant outgrowth control +0.1 -0.5 -0.2 -1.1 -0.0
plant outgrowth control Plant outgrowth control +0.5 -0.4 -1.1 -1.0 +0.1
phage V2_1 -0.0 -0.2 -0.4 -1.2 +0.1
phage V1_1 -0.2 -0.4 -0.1 -0.9 +0.0
phage V2_10 -0.8 -0.3 -0.2 -0.3 +0.1
carbon source Formate (C) -1.1 +0.0 -0.1 +0.1 -0.1
phage V2_10 -0.2 -0.2 +0.2 -0.7 +0.2
carbon source L-Alanine (C) -0.7 +0.1 -0.3 +0.1 +0.3
carbon source Fumarate (C) -0.6 +0.1 -0.4 +0.5 +0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.3 -0.5 +0.6 -0.3
carbon source L-Histidine (C) -0.1 -0.2 -0.4 +0.4 +0.4
carbon source D-Serine (C) -0.3 +0.2 -0.4 +0.5 +0.1
carbon source L-Glutamic (C) -0.6 +0.2 +0.4 +0.4 -0.2
carbon source Ethanol (C) -0.7 +0.2 +0.0 +0.5 +0.2
carbon source Ethanol (C) -0.1 +0.4 +0.3 +0.4 -0.4
carbon source butyrate (C) +0.5 +0.2 +0.5 +0.5 -0.2
phage V2_100 +0.2 -0.2 +0.5 +0.7 +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.4 +0.3 +0.5 +0.2
carbon source L-Phenylalanine (C) -0.1 +0.2 +0.3 +0.6 +0.4
carbon source propionate (C) +0.2 +0.1 -0.1 +0.2 +1.3
carbon source pyruvate (C) +0.5 +0.3 +0.1 +0.6 +0.3
r2a outgrowth control R2A outgrowth control +0.7 +0.3 +0.9 +0.2 +0.3
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ABID97_RS24460
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ABID97_RS24465
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ABID97_RS24475
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ABID97_RS24480
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