Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS24450 and ABID97_RS24455 are separated by 69 nucleotidesABID97_RS24455 and ABID97_RS24460 are separated by 64 nucleotidesABID97_RS24460 and ABID97_RS24465 are separated by 41 nucleotidesABID97_RS24465 and ABID97_RS24470 are separated by 40 nucleotides ABID97_RS24450: ABID97_RS24450 - LysR family transcriptional regulator, at 5,061,153 to 5,062,082 _RS24450 ABID97_RS24455: ABID97_RS24455 - pyruvate kinase, at 5,062,152 to 5,063,567 _RS24455 ABID97_RS24460: ABID97_RS24460 - 2-dehydropantoate 2-reductase, at 5,063,632 to 5,064,645 _RS24460 ABID97_RS24465: ABID97_RS24465 - fumarylacetoacetate hydrolase family protein, at 5,064,687 to 5,065,463 _RS24465 ABID97_RS24470: ABID97_RS24470 - succinate--CoA ligase subunit alpha, at 5,065,504 to 5,066,403 _RS24470
Group Condition ABID97_RS24450 ABID97_RS24455 ABID97_RS24460 ABID97_RS24465 ABID97_RS24470
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.2 +0.2 -1.4 -1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.4 -0.1 -1.4 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.3 -0.5 -0.7 -0.6
phage V2_1 -0.2 -0.3 -0.5 -0.5 -0.1
control NP -0.0 -0.2 -0.5 -1.0 +0.1
plant outgrowth control Plant outgrowth control -0.1 -0.4 +0.5 -0.4 -1.1
phage V1_10 +0.1 -0.2 -0.9 -0.5 +0.0
phage V2_10 +0.2 -0.2 -0.8 -0.3 -0.2
carbon source Formate (C) -0.1 +0.1 -1.1 +0.0 -0.1
carbon source L-Alanine (C) -0.3 +0.1 -0.7 +0.1 -0.3
phage V1_10 +0.2 -0.0 -0.5 -0.7 +0.1
carbon source Ethanol (C) -0.3 +0.3 -0.7 +0.2 +0.0
carbon source Fumarate (C) -0.1 +0.6 -0.6 +0.1 -0.4
carbon source D-Glucuronic Acid (C) -0.5 -0.2 -0.3 +0.2 +0.4
carbon source acetate (C) -0.4 +0.4 -0.3 +0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 +0.2 -0.2 +0.3 -0.5
carbon source L-Arabinose (C) -0.3 +0.4 +0.1 +0.1 -0.4
carbon source D-Mannose (C) -0.2 +0.2 -0.5 +0.1 +0.4
carbon source D-Glucose (C) -0.1 +0.6 -0.5 +0.2 -0.0
carbon source D-Serine (C) +0.0 +0.6 -0.3 +0.2 -0.4
carbon source D-Ribose (C) -0.3 +0.3 +0.1 +0.3 -0.4
carbon source Ethanol (C) -0.5 +0.1 -0.1 +0.4 +0.3
carbon source L-Fucose (C) -0.1 -0.3 +0.3 -0.3 +0.6
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.2 +0.1 +0.4 +0.3
carbon source L-Glutamic (C) -0.0 +0.5 -0.6 +0.2 +0.4
carbon source D-Serine (C) -0.3 +0.4 +0.2 +0.3 +0.1
phage V2_100 +0.4 -0.2 +0.2 -0.2 +0.5
carbon source L-Leucine (C) -0.1 +0.5 +0.2 +0.3 -0.1
carbon source butyrate (C) -0.3 +0.1 +0.5 +0.2 +0.5
r2a outgrowth control R2A outgrowth control +0.0 +0.2 +0.7 +0.3 +0.9
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