Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS24420 and ABID97_RS24425 are separated by 74 nucleotidesABID97_RS24425 and ABID97_RS24430 are separated by 27 nucleotidesABID97_RS24430 and ABID97_RS24435 are separated by 114 nucleotidesABID97_RS24435 and ABID97_RS24440 are separated by 25 nucleotides ABID97_RS24420: ABID97_RS24420 - translocation/assembly module TamB domain-containing protein, at 5,053,601 to 5,057,710 _RS24420 ABID97_RS24425: ABID97_RS24425 - hypothetical protein, at 5,057,785 to 5,058,087 _RS24425 ABID97_RS24430: ABID97_RS24430 - LysR family transcriptional regulator, at 5,058,115 to 5,058,969 _RS24430 ABID97_RS24435: ABID97_RS24435 - hypothetical protein, at 5,059,084 to 5,059,320 _RS24435 ABID97_RS24440: ABID97_RS24440 - oxalate/formate MFS antiporter, at 5,059,346 to 5,060,671 _RS24440
Group Condition ABID97_RS24420 ABID97_RS24425 ABID97_RS24430 ABID97_RS24435 ABID97_RS24440
phage V1_10 -0.9 +0.2 -0.1 N.D. -0.1
carbon source L-Arabinose (C) -0.8 -0.0 +0.1 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.1 -0.1 N.D. +0.2
phage V2_10 -0.3 +0.2 -0.3 N.D. -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.2 -0.0 N.D. -0.2
carbon source Glucuronamide (C) -0.4 +0.2 -0.1 N.D. +0.0
carbon source L-Malic (C) -0.5 +0.2 +0.1 N.D. +0.0
carbon source L-Alanine (C) -0.5 -0.1 +0.2 N.D. +0.4
carbon source casaminos (C) -0.4 +0.3 -0.0 N.D. +0.0
carbon source L-Malic (C) -0.3 +0.2 +0.2 N.D. -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +1.0 -0.3 N.D. +0.0
carbon source D-Serine (C) -0.5 +0.3 +0.2 N.D. +0.1
carbon source D-Mannose (C) -0.2 +0.3 +0.2 N.D. -0.0
phage V2_100 +0.2 +0.4 -0.1 N.D. -0.3
carbon source D-Mannose (C) -0.2 +0.2 +0.2 N.D. +0.1
carbon source D-Ribose (C) +0.4 -0.2 -0.0 N.D. +0.1
carbon source butyrate (C) -0.3 +0.3 +0.0 N.D. +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.3 +0.2 N.D. +0.2
carbon source L-Leucine (C) -0.1 +0.4 +0.1 N.D. +0.1
carbon source L-Histidine (C) -0.2 +0.5 +0.2 N.D. +0.1
carbon source L-tyrosine (C) +0.2 +0.3 +0.1 N.D. -0.1
carbon source L-Leucine (C) +0.1 +0.6 +0.1 N.D. -0.1
carbon source L-Asparagine (C) +0.4 +0.1 +0.1 N.D. +0.0
carbon source D-Xylose (C) +0.4 +0.2 +0.0 N.D. +0.2
carbon source L-Glutamine (C) +0.2 +0.4 +0.2 N.D. +0.0
carbon source D,L-Lactate (C) +0.3 +0.3 +0.2 N.D. +0.0
carbon source L-tyrosine (C) +0.5 +0.5 +0.1 N.D. -0.3
carbon source a-Ketoglutaric (C) +0.4 +0.3 +0.1 N.D. -0.0
carbon source Gly-Glu (C) +0.6 +0.1 -0.1 N.D. +0.2
carbon source propionate (C) +0.8 -0.0 +0.3 N.D. -0.1
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