Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS24400 and ABID97_RS24405 are separated by 25 nucleotidesABID97_RS24405 and ABID97_RS24410 are separated by 25 nucleotidesABID97_RS24410 and ABID97_RS24415 are separated by 72 nucleotidesABID97_RS24415 and ABID97_RS24420 are separated by 14 nucleotides ABID97_RS24400: ABID97_RS24400 - hypothetical protein, at 5,049,499 to 5,049,750 _RS24400 ABID97_RS24405: ABID97_RS24405 - GNAT family N-acetyltransferase, at 5,049,776 to 5,050,372 _RS24405 ABID97_RS24410: ABID97_RS24410 - VWA domain-containing protein, at 5,050,398 to 5,051,585 _RS24410 ABID97_RS24415: ABID97_RS24415 - BamA/TamA family outer membrane protein, at 5,051,658 to 5,053,586 _RS24415 ABID97_RS24420: ABID97_RS24420 - translocation/assembly module TamB domain-containing protein, at 5,053,601 to 5,057,710 _RS24420
Group Condition ABID97_RS24400 ABID97_RS24405 ABID97_RS24410 ABID97_RS24415 ABID97_RS24420
phage V1_10 N.D. -0.1 -0.0 -0.4 -0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 -0.1 -0.4 -0.2
carbon source D-Glucose (C) N.D. -0.2 -0.2 -0.1 -0.3
carbon source L-Arabinose (C) N.D. +0.2 +0.1 -0.1 -0.8
phage V1_10 N.D. +0.1 +0.1 -0.6 -0.2
phage V2_10 N.D. +0.1 -0.0 -0.3 -0.3
carbon source L-Malic (C) N.D. +0.1 -0.0 -0.1 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.1 +0.2 -0.2 -0.5
carbon source D-Serine (C) N.D. +0.1 -0.1 +0.1 -0.5
carbon source Glucuronamide (C) N.D. +0.2 +0.0 -0.1 -0.4
phage V2_100 N.D. -0.4 +0.1 -0.3 +0.2
phage V2_10 N.D. -0.1 +0.1 -0.4 +0.0
carbon source butyrate (C) N.D. -0.1 -0.0 +0.2 -0.3
r2a outgrowth control R2A outgrowth control N.D. -0.0 +0.2 -0.0 -0.4
carbon source L-Alanine (C) N.D. +0.0 +0.2 +0.0 -0.5
carbon source L-Arabinose (C) N.D. +0.1 -0.3 -0.0 +0.2
carbon source L-Lactate (C) N.D. +0.2 -0.0 +0.1 -0.3
carbon source L-Threonine (C) N.D. +0.0 -0.3 +0.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.4 +0.1 +0.1 -0.5
carbon source Glycolic Acid (C) N.D. +0.4 -0.1 +0.1 -0.2
carbon source D-Ribose (C) N.D. -0.0 -0.2 +0.1 +0.4
carbon source D-Gluconic Acid (C) N.D. -0.2 +0.2 +0.1 +0.2
carbon source D,L-Malic Acid (C) N.D. +0.1 -0.2 -0.0 +0.5
carbon source D-Ribose (C) N.D. +0.0 -0.1 -0.0 +0.6
carbon source a-Ketoglutaric (C) N.D. +0.1 -0.0 +0.1 +0.4
carbon source Gly-Glu (C) N.D. +0.0 -0.1 +0.2 +0.6
carbon source L-Asparagine (C) N.D. +0.2 -0.1 +0.1 +0.5
carbon source butyrate (C) N.D. +0.3 -0.0 +0.2 +0.3
carbon source propionate (C) N.D. -0.4 +0.0 +0.6 +0.8
carbon source L-tyrosine (C) N.D. +0.2 +0.2 +0.2 +0.5
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ABID97_RS24400
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ABID97_RS24405
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