Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS24175 and ABID97_RS24180 are separated by 198 nucleotidesABID97_RS24180 and ABID97_RS24185 are separated by 87 nucleotidesABID97_RS24185 and ABID97_RS24190 are separated by 131 nucleotidesABID97_RS24190 and ABID97_RS24195 are separated by 43 nucleotides ABID97_RS24175: ABID97_RS24175 - organic hydroperoxide resistance protein, at 4,996,673 to 4,997,092 _RS24175 ABID97_RS24180: ABID97_RS24180 - response regulator, at 4,997,291 to 4,998,031 _RS24180 ABID97_RS24185: ABID97_RS24185 - thioredoxin family protein, at 4,998,119 to 4,998,703 _RS24185 ABID97_RS24190: ABID97_RS24190 - 3-oxoadipyl-CoA thiolase, at 4,998,835 to 5,000,040 _RS24190 ABID97_RS24195: ABID97_RS24195 - 3-oxoacid CoA-transferase subunit B, at 5,000,084 to 5,000,734 _RS24195
Group Condition ABID97_RS24175 ABID97_RS24180 ABID97_RS24185 ABID97_RS24190 ABID97_RS24195
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 +0.2 -0.0 -5.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.3 +0.0 -0.2 -5.8
carbon source butyrate (C) N.D. -0.8 +0.0 -0.4 -0.5
carbon source butyrate (C) N.D. -0.5 +0.1 -1.4 +0.1
carbon source propionate (C) N.D. -0.7 +0.0 -0.6 -0.1
carbon source Fumarate (C) N.D. -0.8 -0.0 -0.3 +0.0
r2a outgrowth control R2A outgrowth control N.D. -0.8 +0.0 -0.1 -0.1
r2a outgrowth control R2A outgrowth control N.D. -0.9 -0.1 +0.1 -0.1
carbon source Ethanol (C) N.D. -0.7 -0.0 +0.0 -0.3
carbon source L-Fucose (C) N.D. -0.3 +0.2 -0.4 -0.4
carbon source L-tyrosine (C) N.D. +0.4 +0.1 -0.9 -0.5
carbon source D-Mannose (C) N.D. -0.6 -0.0 -0.3 +0.2
phage V1_10 N.D. -0.3 -0.1 -0.5 +0.1
carbon source a-Ketoglutaric (C) N.D. -0.5 +0.4 -0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.6 +0.1 -0.3 +0.3
carbon source L-Leucine (C) N.D. -0.4 +0.1 +0.3 -0.5
carbon source Formate (C) N.D. +0.5 -0.0 +0.2 -0.8
carbon source D-Sorbitol (C) N.D. -0.2 +0.2 +0.3 -0.3
phage V1_1 N.D. -0.0 +0.1 -0.6 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 -0.0 -0.0 +0.5
carbon source acetate (C) N.D. +0.5 -0.0 -0.2 -0.3
carbon source pyruvate (C) N.D. -0.4 -0.1 +0.3 +0.2
phage V2_1 N.D. -0.1 +0.1 -0.4 +0.4
carbon source a-Ketoglutaric (C) N.D. -0.3 +0.7 -0.5 +0.2
r2a outgrowth control R2A outgrowth control N.D. -0.5 +0.1 +0.2 +0.4
carbon source L-Threonine (C) N.D. +0.5 +0.2 -0.3 -0.1
carbon source D,L-Malic Acid (C) N.D. +0.7 -0.2 +0.4 -0.2
carbon source L-tyrosine (C) N.D. +0.7 +0.1 -0.4 +0.5
carbon source L-Histidine (C) N.D. +0.6 +0.0 +0.1 +0.3
carbon source L-Fucose (C) N.D. +0.2 +0.1 +0.4 +0.3
remove
ABID97_RS24175
plot		 remove
ABID97_RS24180
plot		 remove
ABID97_RS24185		 remove
ABID97_RS24190
plot		 remove
ABID97_RS24195
plot