Fitness for 5 genes in Variovorax sp. OAS795

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 111 experiments or choose conditions or try the comparative fitness browser

500 ntABID97_RS23990 and ABID97_RS23995 are separated by 15 nucleotidesABID97_RS23995 and ABID97_RS24000 are separated by 72 nucleotidesABID97_RS24000 and ABID97_RS24005 are separated by 2 nucleotidesABID97_RS24005 and ABID97_RS24010 are separated by 4 nucleotides ABID97_RS23990: ABID97_RS23990 - DUF4148 domain-containing protein, at 4,960,910 to 4,961,203 _RS23990 ABID97_RS23995: ABID97_RS23995 - MaoC family dehydratase, at 4,961,219 to 4,961,680 _RS23995 ABID97_RS24000: ABID97_RS24000 - NAD(P)H-dependent oxidoreductase, at 4,961,753 to 4,962,481 _RS24000 ABID97_RS24005: ABID97_RS24005 - glutathione-regulated potassium-efflux system protein KefC, at 4,962,484 to 4,964,352 _RS24005 ABID97_RS24010: ABID97_RS24010 - amidohydrolase family protein, at 4,964,357 to 4,965,223 _RS24010
Group Condition ABID97_RS23990 ABID97_RS23995 ABID97_RS24000 ABID97_RS24005 ABID97_RS24010
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.6 +0.1 -0.5 -0.4
phage V2_10 N.D. -0.3 -0.4 -0.3 -0.2
phage V1_10 N.D. -0.6 -0.2 -0.1 -0.3
phage V1_1 N.D. -0.6 -0.1 -0.2 -0.1
carbon source Formate (C) N.D. -0.6 +0.0 +0.1 -0.2
carbon source Glycerol (C) N.D. -0.5 +0.1 -0.3 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. -0.5 -0.1 -0.2 +0.2
carbon source Glucuronamide (C) N.D. -0.1 +0.4 -0.1 -0.5
carbon source casaminos (C) N.D. -0.4 +0.2 +0.1 -0.1
carbon source propionate (C) N.D. +0.3 -0.2 -0.2 -0.2
carbon source Glucuronamide (C) N.D. -0.7 +0.1 +0.4 +0.1
carbon source L-Fucose (C) N.D. -0.5 +0.2 +0.2 +0.1
phage V1_10 N.D. +0.6 -0.0 -0.4 -0.2
carbon source L-Histidine (C) N.D. +0.5 +0.2 +0.1 -0.3
carbon source D,L-Malic Acid (C) N.D. +0.6 +0.1 -0.3 -0.0
carbon source Glycolic Acid (C) N.D. +0.6 +0.1 -0.0 -0.2
r2a outgrowth control R2A outgrowth control N.D. +0.6 +0.0 -0.2 +0.2
carbon source a-Ketoglutaric (C) N.D. +0.7 +0.0 +0.1 -0.2
carbon source D-Serine (C) N.D. +0.5 +0.3 +0.0 -0.1
carbon source D-Mannose (C) N.D. +0.5 +0.1 +0.2 -0.2
carbon source L-Tryptophan (C) N.D. +0.6 +0.1 +0.1 -0.1
carbon source L-Arabinose (C) N.D. +0.7 +0.1 +0.2 -0.2
carbon source Fumarate (C) N.D. +0.6 +0.0 +0.3 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. +0.8 -0.1 -0.1 +0.4
carbon source L-Leucine (C) N.D. +0.7 +0.1 +0.1 +0.0
carbon source Tween 20 (C) N.D. +0.7 +0.1 -0.0 +0.3
carbon source a-Ketoglutaric (C) N.D. +0.0 +0.7 +0.2 +0.2
carbon source D-Xylose (C) N.D. +0.5 +0.5 +0.2 +0.1
carbon source L-Alanine (C) N.D. +0.8 -0.1 +0.3 +0.2
carbon source butyrate (C) N.D. +0.8 +0.1 +0.2 +0.1
remove
ABID97_RS23990
plot		 remove
ABID97_RS23995
plot		 remove
ABID97_RS24000		 remove
ABID97_RS24005
plot		 remove
ABID97_RS24010
plot