Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23950 and ABID97_RS23955 are separated by 25 nucleotidesABID97_RS23955 and ABID97_RS23960 are separated by 32 nucleotidesABID97_RS23960 and ABID97_RS23965 are separated by 55 nucleotidesABID97_RS23965 and ABID97_RS23970 are separated by 58 nucleotides ABID97_RS23950: ABID97_RS23950 - cytochrome c oxidase assembly protein, at 4,954,213 to 4,954,839 _RS23950 ABID97_RS23955: ABID97_RS23955 - cytochrome oxidase small assembly protein, at 4,954,865 to 4,954,981 _RS23955 ABID97_RS23960: ABID97_RS23960 - cytochrome c oxidase subunit I, at 4,955,014 to 4,956,645 _RS23960 ABID97_RS23965: ABID97_RS23965 - cytochrome c oxidase subunit II, at 4,956,701 to 4,957,879 _RS23965 ABID97_RS23970: ABID97_RS23970 - DUF2244 domain-containing protein, at 4,957,938 to 4,958,414 _RS23970
Group Condition ABID97_RS23950 ABID97_RS23955 ABID97_RS23960 ABID97_RS23965 ABID97_RS23970
carbon source L-Alanine (C) -3.1 N.D. -2.9 -2.8 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 N.D. -3.8 -3.6 -0.1
carbon source L-Alanine (C) -2.9 N.D. -2.5 -2.8 -1.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 N.D. -2.7 -3.5 -0.3
carbon source D-Glucuronic Acid (C) -3.0 N.D. -2.2 -2.2 -0.8
carbon source 4-Hydroxybenzoic Acid (C) -2.6 N.D. -2.0 -2.1 -1.0
carbon source 4-Hydroxybenzoic Acid (C) -2.3 N.D. -2.2 -2.1 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 N.D. -2.7 -3.1 -0.3
carbon source D-Arabinose (C) -2.0 N.D. -1.5 -2.0 -1.2
carbon source D-Ribose (C) -2.1 N.D. -1.6 -1.8 -1.0
carbon source Tween 20 (C) -1.9 N.D. -1.7 -1.9 -0.8
carbon source D-Arabinose (C) -1.7 N.D. -1.6 -1.7 -1.1
carbon source D-Ribose (C) -2.1 N.D. -1.2 -1.5 -1.0
carbon source Tween 20 (C) -1.8 N.D. -1.7 -1.7 -0.6
carbon source Gly-Glu (C) -1.7 N.D. -1.1 -1.3 -1.1
carbon source L-Fucose (C) -1.4 N.D. -1.0 -1.2 -1.0
carbon source L-Threonine (C) -1.5 N.D. -0.9 -1.1 -0.8
carbon source L-Malic (C) -1.4 N.D. -0.9 -0.7 -1.1
carbon source L-Leucine (C) -1.4 N.D. -0.8 -0.9 -0.9
carbon source Gly-Glu (C) -1.2 N.D. -0.9 -0.9 -1.0
carbon source L-Threonine (C) -1.3 N.D. -0.6 -1.0 -0.9
carbon source L-Tryptophan (C) -1.3 N.D. -0.8 -1.0 -0.8
carbon source a-Ketoglutaric (C) -1.2 N.D. -0.9 -1.0 -0.7
carbon source L-Fucose (C) -1.0 N.D. -0.8 -1.1 -0.7
carbon source L-Leucine (C) -1.4 N.D. -0.6 -1.0 -0.7
carbon source 2-Deoxy-D-Ribose (C) -1.2 N.D. -0.8 -1.1 -0.5
carbon source L-Histidine (C) -1.1 N.D. -1.1 -1.2 -0.2
r2a outgrowth control R2A outgrowth control -0.9 N.D. -0.7 -1.1 -0.9
carbon source butyrate (C) +5.2 N.D. +5.6 +5.3 -0.9
carbon source butyrate (C) +5.9 N.D. +6.3 +5.9 -1.2
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ABID97_RS23950
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