Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23840 and ABID97_RS23845 are separated by 59 nucleotidesABID97_RS23845 and ABID97_RS23850 overlap by 4 nucleotidesABID97_RS23850 and ABID97_RS23855 are separated by 10 nucleotidesABID97_RS23855 and ABID97_RS23860 are separated by 41 nucleotides ABID97_RS23840: ABID97_RS23840 - 5-oxoprolinase subunit PxpA, at 4,934,332 to 4,935,072 _RS23840 ABID97_RS23845: ABID97_RS23845 - biotin-dependent carboxyltransferase family protein, at 4,935,132 to 4,936,127 _RS23845 ABID97_RS23850: ABID97_RS23850 - 5-oxoprolinase subunit PxpB, at 4,936,124 to 4,936,771 _RS23850 ABID97_RS23855: ABID97_RS23855 - pantetheine-phosphate adenylyltransferase, at 4,936,782 to 4,937,285 _RS23855 ABID97_RS23860: ABID97_RS23860 - RsmD family RNA methyltransferase, at 4,937,327 to 4,937,992 _RS23860
Group Condition ABID97_RS23840 ABID97_RS23845 ABID97_RS23850 ABID97_RS23855 ABID97_RS23860
carbon source L-tyrosine (C) -0.0 -0.7 -0.1 N.D. +1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.7 +0.8 N.D. +0.6
carbon source L-Histidine (C) -0.1 -0.3 -0.2 N.D. +1.4
carbon source D,L-Malic Acid (C) +0.2 +0.1 -0.4 N.D. +1.4
carbon source Glucuronamide (C) -0.0 -0.5 +0.3 N.D. +1.5
carbon source L-Proline (C) -0.4 +0.1 -0.1 N.D. +1.7
carbon source L-Leucine (C) +0.0 -0.1 -0.3 N.D. +1.8
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.3 -0.0 N.D. +2.0
carbon source L-Phenylalanine (C) +0.0 +0.1 -0.3 N.D. +1.6
carbon source L-Phenylalanine (C) -0.0 +0.1 -0.5 N.D. +1.8
carbon source L-Tryptophan (C) +0.2 -0.2 -0.3 N.D. +1.8
carbon source casaminos (C) -0.1 +0.2 -0.2 N.D. +1.6
carbon source D-Arabinose (C) -0.1 +0.1 -0.1 N.D. +1.7
carbon source L-Histidine (C) +0.1 +0.5 -0.2 N.D. +1.3
carbon source Gly-Glu (C) +0.1 +0.3 -0.1 N.D. +1.5
carbon source pyruvate (C) +0.1 +0.4 -0.1 N.D. +1.4
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.2 +0.2 N.D. +1.7
carbon source D,L-Lactate (C) -0.1 +0.3 -0.0 N.D. +1.7
carbon source D-Sorbitol (C) -0.2 +0.4 +0.2 N.D. +1.4
r2a outgrowth control R2A outgrowth control -0.1 +0.3 +0.3 N.D. +1.3
carbon source L-Tryptophan (C) -0.1 +0.4 +0.1 N.D. +1.6
carbon source L-Leucine (C) +0.0 +0.2 -0.1 N.D. +2.0
carbon source L-Lactate (C) +0.3 +0.1 -0.0 N.D. +1.7
carbon source D-Gluconic Acid (C) +0.1 +0.3 +0.3 N.D. +1.4
carbon source L-Alanine (C) -0.0 +0.2 +0.2 N.D. +1.9
carbon source Tween 20 (C) +0.0 +0.4 +0.2 N.D. +1.7
carbon source acetate (C) +0.3 +0.6 +0.1 N.D. +1.5
carbon source Glycerol (C) +0.0 +0.6 -0.1 N.D. +2.0
carbon source Tween 20 (C) +0.1 +0.4 -0.0 N.D. +2.0
carbon source L-Alanine (C) -0.1 +0.6 +0.1 N.D. +2.0
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