Fitness for 5 genes in Variovorax sp. OAS795

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500 ntABID97_RS23820 and ABID97_RS23825 are separated by 48 nucleotidesABID97_RS23825 and ABID97_RS23830 are separated by 110 nucleotidesABID97_RS23830 and ABID97_RS23835 overlap by 13 nucleotidesABID97_RS23835 and ABID97_RS23840 are separated by 15 nucleotides ABID97_RS23820: ABID97_RS23820 - tetratricopeptide repeat protein, at 4,930,758 to 4,932,116 _RS23820 ABID97_RS23825: ABID97_RS23825 - histidine phosphatase family protein, at 4,932,165 to 4,932,857 _RS23825 ABID97_RS23830: ABID97_RS23830 - alpha/beta fold hydrolase, at 4,932,968 to 4,933,669 _RS23830 ABID97_RS23835: ABID97_RS23835 - pyroglutamyl-peptidase I, at 4,933,657 to 4,934,316 _RS23835 ABID97_RS23840: ABID97_RS23840 - 5-oxoprolinase subunit PxpA, at 4,934,332 to 4,935,072 _RS23840
Group Condition ABID97_RS23820 ABID97_RS23825 ABID97_RS23830 ABID97_RS23835 ABID97_RS23840
carbon source D-Mannose (C) -0.9 N.D. -0.4 -0.6 -0.2
carbon source butyrate (C) -1.0 N.D. -0.4 -0.3 -0.3
carbon source L-Histidine (C) -0.8 N.D. -0.4 -0.3 -0.1
carbon source D-Arabinose (C) -0.8 N.D. -0.6 -0.1 -0.1
carbon source acetate (C) -0.7 N.D. -0.4 -0.3 -0.1
carbon source D-Glucose (C) -0.7 N.D. -0.5 -0.1 -0.1
carbon source Formate (C) -0.6 N.D. -0.4 -0.1 -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.7 N.D. -0.9 +0.3 +0.1
carbon source L-Proline (C) -0.5 N.D. -0.3 -0.2 -0.4
carbon source D-Arabinose (C) -0.9 N.D. -0.1 -0.1 -0.1
carbon source propionate (C) -0.4 N.D. -0.6 -0.1 -0.1
carbon source L-tyrosine (C) -0.5 N.D. -0.7 +0.2 -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.7 N.D. -0.5 +0.1 -0.1
carbon source D-Mannose (C) -0.9 N.D. -0.5 +0.2 +0.0
carbon source propionate (C) -0.4 N.D. -0.5 -0.1 -0.2
carbon source D-Glucose (C) -0.5 N.D. -0.5 -0.0 -0.1
carbon source L-tyrosine (C) -0.2 N.D. -0.4 -0.5 -0.0
carbon source L-Fucose (C) -0.6 N.D. -0.1 -0.3 -0.1
carbon source L-Leucine (C) -0.7 N.D. -0.5 +0.0 +0.0
carbon source butyrate (C) -0.7 N.D. -0.6 +0.4 -0.1
carbon source D-Ribose (C) -0.7 N.D. -0.4 +0.1 -0.1
carbon source L-Malic (C) -0.6 N.D. -0.4 +0.0 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 N.D. -0.4 -0.0 +0.2
carbon source acetate (C) -0.6 N.D. -0.6 +0.0 +0.3
carbon source L-Leucine (C) -0.6 N.D. -0.4 +0.2 +0.0
carbon source Gly-Glu (C) -0.6 N.D. -0.5 +0.3 +0.0
carbon source L-Arabinose (C) -0.5 N.D. -0.2 +0.2 -0.2
carbon source L-Threonine (C) -0.6 N.D. -0.2 -0.2 +0.3
carbon source D-Ribose (C) -0.7 N.D. -0.3 +0.1 +0.2
r2a outgrowth control R2A outgrowth control -0.2 N.D. -0.3 -0.4 +0.3
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